Gene Sros_4587 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_4587 
Symbol 
ID8667881 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp5100967 
End bp5101689 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content71% 
IMG OID 
Productprotease, CAAX amino terminal family 
Protein accessionYP_003340192 
Protein GI271965996 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000987036 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0574334 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGTTCA CCCCTTTGAC ACTCGTCCTG GCGGTCGTCC TTGTCGGCTA CCTGGCCGTC 
GCCAGTCCCC TGCTCGGCAA GCGCACCTAC GACAAGCTGG CCCGTACCCG CGATCAGGAC
CCCACCGCCT ACCGCCGGAT GTTCACGCTC TGGAGCGCCG AGCTGTGGGC GCTGGCCGCC
GCGGCGCTGC TCATCGTCAC CGTGGAACCG GGCCTTGACG CCGCGGACAT CGGCCTGGTG
ATCAAGGAGG TTCCGAGCGA GATCCTCGGC ACGATCGTCG GATTCCTGGT CGCCGCCACG
GTCGGCGTGC TCGTCCTCAG ATGGCTGGCG GCCAGGGGCA AGCCCGTCCC CGGGCAGCAG
GCCGTCCACC ACCTGCTGCC GCGCACCACG GCCGAGCGCT GGTACGCCGC GGGCCTGTCG
GTGACCGCGG GCATCACCGA GGAGATCGTC TACCGGGGCC TGCTCATCGC GGTCGGCATG
GGCGCGCTCG GCCTGAGCAA GGAGGTCGCG GCCGTCGGCG CGCTGGCGGT GTTCGTCGCC
GGCCACCTTT ACCAGGGCTG GCGCGGCATG CTCGTGGTCA CCCTGCTCGG CGCCGGCCTG
ACCTCGCTCT ATCTGAGGAC CGGCAGCCTG CTCCTGCCGA TCCTGCTCCA CGCGCTGATC
GACCTGCGCG GCCTGGTGTT CGTCCCGCGT CCGCGACGTG CGGTGGTCGA GCACGCATGC
TAG
 
Protein sequence
MSFTPLTLVL AVVLVGYLAV ASPLLGKRTY DKLARTRDQD PTAYRRMFTL WSAELWALAA 
AALLIVTVEP GLDAADIGLV IKEVPSEILG TIVGFLVAAT VGVLVLRWLA ARGKPVPGQQ
AVHHLLPRTT AERWYAAGLS VTAGITEEIV YRGLLIAVGM GALGLSKEVA AVGALAVFVA
GHLYQGWRGM LVVTLLGAGL TSLYLRTGSL LLPILLHALI DLRGLVFVPR PRRAVVEHAC