Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_4587 |
Symbol | |
ID | 8667881 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | + |
Start bp | 5100967 |
End bp | 5101689 |
Gene Length | 723 bp |
Protein Length | 240 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | |
Product | protease, CAAX amino terminal family |
Protein accession | YP_003340192 |
Protein GI | 271965996 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.000987036 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.0574334 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGTTCA CCCCTTTGAC ACTCGTCCTG GCGGTCGTCC TTGTCGGCTA CCTGGCCGTC GCCAGTCCCC TGCTCGGCAA GCGCACCTAC GACAAGCTGG CCCGTACCCG CGATCAGGAC CCCACCGCCT ACCGCCGGAT GTTCACGCTC TGGAGCGCCG AGCTGTGGGC GCTGGCCGCC GCGGCGCTGC TCATCGTCAC CGTGGAACCG GGCCTTGACG CCGCGGACAT CGGCCTGGTG ATCAAGGAGG TTCCGAGCGA GATCCTCGGC ACGATCGTCG GATTCCTGGT CGCCGCCACG GTCGGCGTGC TCGTCCTCAG ATGGCTGGCG GCCAGGGGCA AGCCCGTCCC CGGGCAGCAG GCCGTCCACC ACCTGCTGCC GCGCACCACG GCCGAGCGCT GGTACGCCGC GGGCCTGTCG GTGACCGCGG GCATCACCGA GGAGATCGTC TACCGGGGCC TGCTCATCGC GGTCGGCATG GGCGCGCTCG GCCTGAGCAA GGAGGTCGCG GCCGTCGGCG CGCTGGCGGT GTTCGTCGCC GGCCACCTTT ACCAGGGCTG GCGCGGCATG CTCGTGGTCA CCCTGCTCGG CGCCGGCCTG ACCTCGCTCT ATCTGAGGAC CGGCAGCCTG CTCCTGCCGA TCCTGCTCCA CGCGCTGATC GACCTGCGCG GCCTGGTGTT CGTCCCGCGT CCGCGACGTG CGGTGGTCGA GCACGCATGC TAG
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Protein sequence | MSFTPLTLVL AVVLVGYLAV ASPLLGKRTY DKLARTRDQD PTAYRRMFTL WSAELWALAA AALLIVTVEP GLDAADIGLV IKEVPSEILG TIVGFLVAAT VGVLVLRWLA ARGKPVPGQQ AVHHLLPRTT AERWYAAGLS VTAGITEEIV YRGLLIAVGM GALGLSKEVA AVGALAVFVA GHLYQGWRGM LVVTLLGAGL TSLYLRTGSL LLPILLHALI DLRGLVFVPR PRRAVVEHAC
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