Gene Sros_4585 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_4585 
Symbol 
ID8667879 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp5099537 
End bp5100748 
Gene Length1212 bp 
Protein Length403 aa 
Translation table11 
GC content71% 
IMG OID 
Productputative membrane transport protein 
Protein accessionYP_003340190 
Protein GI271965994 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00668253 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.163129 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGGACGA GAAATTTCAC CCTCTACTTC GGGGCCCGCA CGATCTCGCT GCTCGGTGAC 
GCGATGATGC CCGTCGCCTC GGCGCTGGCG ATCGGGAAAG TCTACGGGAT CGCGGGCGTC
GGCTACGTGC TCGCGATCTG GACCGCGTCG GCTGTGCTGG TCATGCTGTT CGGCGGGGTT
TTCGCCGACC GGATCGGCGC CCGGCGCTTG ATGATCGGCG CGGACATACT CAGGGTCGTC
ACTCAGGGGT GTGTGGCCGT CGCCTTCCTG GATGGCGCGC CGCCGCTCGC CCTGTTGCTG
GCGATGGCGT TCTTGTCGGG CATAGGCGCC GGAACGTTCG AACCGTGCGT CAACGGCATG
GTCCCCCTGG TCGCCAAAGA TCCGCAGCGG GCCAACGCGA CGCTGAAGAT CGCCGAGGCG
GTCACCCAGC TGGCGGGCCC CGCACTGGCC GGAGTCCTCG TCGTCGTCGC CGGGCCGGTC
TTCGTCTACA CGGTGGACGC CGCGACGTTC CTGGTCAGCG GGGTGTTCCT GCTGCTGGTC
CGGGTCGCCG TACCCAGGCC GGAGCCCTCC AACGTGCTGA GCGACCTGCG CAGGGGCTGG
GAGGAGTTCA AGGCCAGGAG CTGGATGTGG TCGGTCATCC TGGTCTGGGT GTTCTGGGGC
GTTCTGGTGG TCGGGCCGTA CGTGCCGCTG TCGTCGCAGG TCATCGGGGC CGACTACGGC
TGGGTGATGG CGGCGCTCGG CCTCGGCACT GTGCTGGGCG GGCTGGTGGC GATCAGGCTC
AGGCCGCGCA GGCCGCTGGC GGCCGGGGCG GCGGCGCTGA GCGGGTACGT GGCGGTGCCG
CTGACGGTCG CGCTCGGGCT GCCGCTGCCG CTGCTGATGG CCGGGCACCT GCTCGGGGGG
TGCGCGTTGG CGTTCTGGTC GGTGATGTGG TCGACCAGCG TGCAGACGCA GGTCGCGCCG
GACGTGGTGA ACCGGGTCAA CGCCTACCAG GTGGCCGGGT CGGTCGCGGG CATGGCAGTC
GGGCAGGCGC TGGCCGGTCC GGTCGCCACG CTGGTCGAAC CGCGCTCCTT CATGCTGGGG
TCGGCCCTGG TGACGGTCGG CGTGGTGGCG GCGCTGCTGC TGATCAAGCC GGTCAGGCGG
CTGGGCCGGG ACCCTCAGGA GGCCGGAGGC CAGTCGGTCC CGGTCCCGGT ACCGGCCGGC
TTGCCGACGT AG
 
Protein sequence
MWTRNFTLYF GARTISLLGD AMMPVASALA IGKVYGIAGV GYVLAIWTAS AVLVMLFGGV 
FADRIGARRL MIGADILRVV TQGCVAVAFL DGAPPLALLL AMAFLSGIGA GTFEPCVNGM
VPLVAKDPQR ANATLKIAEA VTQLAGPALA GVLVVVAGPV FVYTVDAATF LVSGVFLLLV
RVAVPRPEPS NVLSDLRRGW EEFKARSWMW SVILVWVFWG VLVVGPYVPL SSQVIGADYG
WVMAALGLGT VLGGLVAIRL RPRRPLAAGA AALSGYVAVP LTVALGLPLP LLMAGHLLGG
CALAFWSVMW STSVQTQVAP DVVNRVNAYQ VAGSVAGMAV GQALAGPVAT LVEPRSFMLG
SALVTVGVVA ALLLIKPVRR LGRDPQEAGG QSVPVPVPAG LPT