Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_4585 |
Symbol | |
ID | 8667879 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | + |
Start bp | 5099537 |
End bp | 5100748 |
Gene Length | 1212 bp |
Protein Length | 403 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | |
Product | putative membrane transport protein |
Protein accession | YP_003340190 |
Protein GI | 271965994 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00668253 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.163129 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTGGACGA GAAATTTCAC CCTCTACTTC GGGGCCCGCA CGATCTCGCT GCTCGGTGAC GCGATGATGC CCGTCGCCTC GGCGCTGGCG ATCGGGAAAG TCTACGGGAT CGCGGGCGTC GGCTACGTGC TCGCGATCTG GACCGCGTCG GCTGTGCTGG TCATGCTGTT CGGCGGGGTT TTCGCCGACC GGATCGGCGC CCGGCGCTTG ATGATCGGCG CGGACATACT CAGGGTCGTC ACTCAGGGGT GTGTGGCCGT CGCCTTCCTG GATGGCGCGC CGCCGCTCGC CCTGTTGCTG GCGATGGCGT TCTTGTCGGG CATAGGCGCC GGAACGTTCG AACCGTGCGT CAACGGCATG GTCCCCCTGG TCGCCAAAGA TCCGCAGCGG GCCAACGCGA CGCTGAAGAT CGCCGAGGCG GTCACCCAGC TGGCGGGCCC CGCACTGGCC GGAGTCCTCG TCGTCGTCGC CGGGCCGGTC TTCGTCTACA CGGTGGACGC CGCGACGTTC CTGGTCAGCG GGGTGTTCCT GCTGCTGGTC CGGGTCGCCG TACCCAGGCC GGAGCCCTCC AACGTGCTGA GCGACCTGCG CAGGGGCTGG GAGGAGTTCA AGGCCAGGAG CTGGATGTGG TCGGTCATCC TGGTCTGGGT GTTCTGGGGC GTTCTGGTGG TCGGGCCGTA CGTGCCGCTG TCGTCGCAGG TCATCGGGGC CGACTACGGC TGGGTGATGG CGGCGCTCGG CCTCGGCACT GTGCTGGGCG GGCTGGTGGC GATCAGGCTC AGGCCGCGCA GGCCGCTGGC GGCCGGGGCG GCGGCGCTGA GCGGGTACGT GGCGGTGCCG CTGACGGTCG CGCTCGGGCT GCCGCTGCCG CTGCTGATGG CCGGGCACCT GCTCGGGGGG TGCGCGTTGG CGTTCTGGTC GGTGATGTGG TCGACCAGCG TGCAGACGCA GGTCGCGCCG GACGTGGTGA ACCGGGTCAA CGCCTACCAG GTGGCCGGGT CGGTCGCGGG CATGGCAGTC GGGCAGGCGC TGGCCGGTCC GGTCGCCACG CTGGTCGAAC CGCGCTCCTT CATGCTGGGG TCGGCCCTGG TGACGGTCGG CGTGGTGGCG GCGCTGCTGC TGATCAAGCC GGTCAGGCGG CTGGGCCGGG ACCCTCAGGA GGCCGGAGGC CAGTCGGTCC CGGTCCCGGT ACCGGCCGGC TTGCCGACGT AG
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Protein sequence | MWTRNFTLYF GARTISLLGD AMMPVASALA IGKVYGIAGV GYVLAIWTAS AVLVMLFGGV FADRIGARRL MIGADILRVV TQGCVAVAFL DGAPPLALLL AMAFLSGIGA GTFEPCVNGM VPLVAKDPQR ANATLKIAEA VTQLAGPALA GVLVVVAGPV FVYTVDAATF LVSGVFLLLV RVAVPRPEPS NVLSDLRRGW EEFKARSWMW SVILVWVFWG VLVVGPYVPL SSQVIGADYG WVMAALGLGT VLGGLVAIRL RPRRPLAAGA AALSGYVAVP LTVALGLPLP LLMAGHLLGG CALAFWSVMW STSVQTQVAP DVVNRVNAYQ VAGSVAGMAV GQALAGPVAT LVEPRSFMLG SALVTVGVVA ALLLIKPVRR LGRDPQEAGG QSVPVPVPAG LPT
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