Gene Sros_4580 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_4580 
Symbol 
ID8667874 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp5093621 
End bp5094400 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content70% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003340185 
Protein GI271965989 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.189459 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGACA TCCGGTACAT CGTGCGGTCG GAGTGGATCA AGCTTGGATC GGTGCGGTCG 
ACGTGGTGGT GCCTGGGGGC GGCGACGGTG CTCGTGCTGG TGTTCGGAGT GCTGACGGCG
TTGTCGGTCG ATCCGGTCGA AGCGGCGGCG CTACCCAAGG CCTGGCTGGT GGAGGGCGGG
TTCGACCCGC TTGAGCCGCT GAGCGCCGTG CTGCTGGCGC AGTTCGCGTT CGGGGTGCTG
GGAGTGCTGA CGGTCACCTC GGAGTACTCG ACCGGGCAGA TCCGCAGCTC GCTGCTGGCC
GTTCCGCGGC GGCGGCGGCT CTTGGCGGCG AAGCTGGCGG TGCTGGCTGC GCTGGTCGCG
GCGGTGGCGT CGGCGCTCAC GTTCGGGACG TTCTTCCTGA CCCAGGCCCT CTACCCGGAC
GGGCTCGGGA TCGGGCTGGG CGATGGCGGC GCTTGGAAGG CCCTGCTCGG CGGCGTCGCC
TACACGGTCT TCATCGCGGT GTTCGGGTTC GCGGTCGGTG CGGCAGTGCG CGGGACAGGG
GCGGCGATCA CGGTGTTCAT GGTGGTGACG TTCGTGGTGA TGAGCGCCCT GCCCGCAGTG
TTCCCCAGCT CGCTGCAGGA GCAGGCCGTC CGCTACACCT TCATCGGGCT CGCCGAATCA
CTGACGACGC TCCAGCCGGA TCCCCGGCCG GGAATGCTCG TGGCCGCTCT GCTCTTGGCC
GCGTACGCCG TCCTCGTGCT GGCCCCGGTG CTGCTGCTGG TGGAGCGGCG GGACAGCTGA
 
Protein sequence
MTDIRYIVRS EWIKLGSVRS TWWCLGAATV LVLVFGVLTA LSVDPVEAAA LPKAWLVEGG 
FDPLEPLSAV LLAQFAFGVL GVLTVTSEYS TGQIRSSLLA VPRRRRLLAA KLAVLAALVA
AVASALTFGT FFLTQALYPD GLGIGLGDGG AWKALLGGVA YTVFIAVFGF AVGAAVRGTG
AAITVFMVVT FVVMSALPAV FPSSLQEQAV RYTFIGLAES LTTLQPDPRP GMLVAALLLA
AYAVLVLAPV LLLVERRDS