Gene Sros_4560 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_4560 
Symbol 
ID8667854 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp5076752 
End bp5077156 
Gene Length405 bp 
Protein Length134 aa 
Translation table11 
GC content67% 
IMG OID 
Producttranscriptional modulator of MazE/toxin, MazF 
Protein accessionYP_003340166 
Protein GI271965970 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00144054 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0401212 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCAACGTG GCGAAGTCTG GTGGGTCGCG TTCGACGAAC GCCGGCCGGT CGTCCTGCTG 
TCAGGAGACG ACGCGTCCGG GATCCGGGCG ATGCAGGTCG TCGCTCCGGC GGGCGTCGAC
CTCAGCGGTC TGGGCGTTGA AGTGGCAGTA GGAGCCGGGG AAGGACTGCC CTTCGAAGGC
GTGCTGCGGA TAGCGTTCCC TCGTCCAGGC ATGACTCCTT GCACGTGGCT GACCACGGTG
TCCCGGGACG ACCTGATTGA GCAGGCGGGC GTCCTGTCCT CCGCGAAACT CAGTGAGATC
GAGGATGCCC TCCGTCTCGG GGAGCAGGCG AAGGAGTGGA CCCCAGCCAC GACCGCGAAA
CTCAGCGAGA TGAGGGACGC CCTCCGTCTC GGTGGACTCA GGTAG
 
Protein sequence
MQRGEVWWVA FDERRPVVLL SGDDASGIRA MQVVAPAGVD LSGLGVEVAV GAGEGLPFEG 
VLRIAFPRPG MTPCTWLTTV SRDDLIEQAG VLSSAKLSEI EDALRLGEQA KEWTPATTAK
LSEMRDALRL GGLR