Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_4559 |
Symbol | |
ID | 8667853 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | + |
Start bp | 5075862 |
End bp | 5076650 |
Gene Length | 789 bp |
Protein Length | 262 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | |
Product | Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase)-like protein |
Protein accession | YP_003340165 |
Protein GI | 271965969 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0324946 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.0433101 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAACCCGT CCCAGACGCG GGTCAGCGGG GCGAGCAGGG ACGTTCGCTC TGCCGCCTAT AATGCCGGCC GTACGCTCGA GAATGTCGAG CGTACGGCTG GGGAGATCGT GGCTGCTGGT GGCCAGGCGT TCGGGATGCG GGTGGACGTG GCATCGCCTG AGGACAACGA TGCGATGGTG CGCGAGACGG TCGCCCGTTA CGGCGCCGTG CACATCGCGC ACCTCAACGC CGCGACGGGA CACTGGGCCG GTGTGCTGGA TCACCCGCTG GAGGAGTGGG ACCGCACCAT GGCGGTGAAC CTGCGTGGTG TGCTGCTCGG TTTGCAGGCG GCGGGCCGGG CGATGCGCGA CGCGAGTGGT GGCTCGGTCG TGGTCACCTC CTCGGCTGCC GGGCTCACCG GTGTTCGGAT GTCAGCGGCG TACGCGGCGT CGAAGCACGG TGTGCTCGGG CTGGTCAAGT CGGCTGCCCT GGAACTGGGG CCGGTCGGTA TCCGGGTCAA CGCCATCTGC CCGGGATACA TCGCCAGCAA CGATCTCACC CGGAAAATGG GCGAAGAGCT TGACGTCGCC AGCCGATTTC CGCTGGGCCG ACCTGGGCGC AGCGAGGAGG TCGCCAACCT GGTCGCGTTC CTGGCCGGTG ACAGCGCTTC GTTCATCACG GGCAGCGTGT TCACCATCGA TGGCGGCTGG CTGGCCGGCG GCATCACGCT CGAGAGCGAT GCCGAGCAAC CAACGACCAG CGACGACCGA ATGGCTGCCA TGGCCAACAC GCCCTCCCTA CGCTCGTAG
|
Protein sequence | MNPSQTRVSG ASRDVRSAAY NAGRTLENVE RTAGEIVAAG GQAFGMRVDV ASPEDNDAMV RETVARYGAV HIAHLNAATG HWAGVLDHPL EEWDRTMAVN LRGVLLGLQA AGRAMRDASG GSVVVTSSAA GLTGVRMSAA YAASKHGVLG LVKSAALELG PVGIRVNAIC PGYIASNDLT RKMGEELDVA SRFPLGRPGR SEEVANLVAF LAGDSASFIT GSVFTIDGGW LAGGITLESD AEQPTTSDDR MAAMANTPSL RS
|
| |