Gene Sros_4517 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_4517 
Symbol 
ID8667811 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp5036895 
End bp5037812 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content72% 
IMG OID 
ProductRNA polymerase, sigma-24 subunit, ECF subfamily 
Protein accessionYP_003340125 
Protein GI271965929 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.407831 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.243711 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCGCG CCGAGGAGTT CGAACAGCTG CGGCCGCTGC TGTTCTCGAT CGCCTACCGG 
CTCCTGAGCA GTGTGAGCGA GGCCGAGGAC GTGGTCCAGG AGGCATGGCT GCGCTGGGAG
GCCACCCCGA CCCGACCCGC GTCGCCCAAG GCGTTCCTGT CGGCCATCGT GAGCCGGATC
TCGATCGACG TGCTGCGCTC GGCTCGCGTC CGGCGCGAGG AGTACGTCGG GCCGTGGTTC
CCCGAGCCGC TGCTGACCGA CCCGTATGAG GACCCGGAGC ACTCGGCGGA GCTGGCCGAC
TCGGTGTCGA TGGCGGCCCT GCTGCTGCTG GAGCGGCTCA GCCCGCTCGA ACGCGCGGTC
TTCGTGCTGC GGGAGGTGTT CGGGTTCGGC TTCGGGGAGA TCGCCTCCGC CGTGGGGCGC
TCGGAGGCGG CGTGCCGCCA GCTCGTGGTA CGGGCACGCC GCCACATGGA CGAGGGCCGG
CCCCGGTTCG AAGCAGACCG GACCGAGCGC GAGGAGCTCG CCGGGCGATT CCTCGAGGCC
TTCCGGGACG GGGACGTCAA CGGGCTGACC GCGCTGCTGG CCGCCGACGT CCAGATGGTC
GGCGACGGCG GCGGCAAGGC CCCGCAATGG GCCGACCGCT TCGTCGGTGC CGAGAACGTG
GCCCGGATGC TCGCCGCGCT CGTCCCGCTG TTCGCCCGGA TCGGAGCGGA GATGGAGCCG
CATGAGGTGA ACGGCCAGCC AGGCGCGATC TTCCGTGACC GGGACGGCAG GGTCCTCAAC
ACCTGGGCGC TCGACATCCT CGACGGGCAG ATCCAGACGC TCCGTACGGT GAGCAACCCC
GACAAGCTCG GACACGTGGG TCCCGTGGCC GACGCCTGGG CGGCCCTGCG CGAAGGAAGC
GGGTCCACCA GCCCATGA
 
Protein sequence
MTRAEEFEQL RPLLFSIAYR LLSSVSEAED VVQEAWLRWE ATPTRPASPK AFLSAIVSRI 
SIDVLRSARV RREEYVGPWF PEPLLTDPYE DPEHSAELAD SVSMAALLLL ERLSPLERAV
FVLREVFGFG FGEIASAVGR SEAACRQLVV RARRHMDEGR PRFEADRTER EELAGRFLEA
FRDGDVNGLT ALLAADVQMV GDGGGKAPQW ADRFVGAENV ARMLAALVPL FARIGAEMEP
HEVNGQPGAI FRDRDGRVLN TWALDILDGQ IQTLRTVSNP DKLGHVGPVA DAWAALREGS
GSTSP