Gene Sros_4487 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_4487 
Symbol 
ID8667781 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp5003625 
End bp5005841 
Gene Length2217 bp 
Protein Length738 aa 
Translation table11 
GC content70% 
IMG OID 
ProductExodeoxyribonuclease V 
Protein accessionYP_003340096 
Protein GI271965900 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00100877 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAGCCTG GATCGGGTGG TCCCTCTGCC GCGTCCATCG ACGCCGTCCT CGAACGCATC 
ACCTACGCCA ACGAGGAGAC CGGCTACACC ATCGCCAGGG TGGCCACCGA ACGCTCGGGC
AGCGATCTGC TGACCGTCGT CGGGCCGCTG CTGGGCGCCC AGCCCGGCGA GTCGCTGCGG
CTGACCGGGC GCTGGACCTC CCATCCCAAG TACGGCAAGC AGTTCGAGGT ATGGTCCTAC
GCCACCGTGC TGCCCGCCAC CGTCCAGGGC ATCCAGCGCT ACCTCGGCTC CGGGCTGATC
AAGGGCATCG GGCCGAAGAT GGCCGAGCGG ATCGTCGACC ACTTCGGCGC CGACACCCTG
CAGATCATCG AGACCGCCCC CGAGCGGCTG GTCGAGGTCC CCGGCCTCGG CCCCAAGCGG
ACCAAGATGA TCGGCATCGC CTGGGAGGAA CAGAAGATCA TCAAAGAGGT GATGATCTTC
CTTCAGGGAG TCGGCGTCTC GACCTCCATC GCGGTGCGGA TCTTCAAGCA GTACGGCGAC
GCCTCCATCA CGGTCGTCAA GAGCGAGCCC TACCGGCTGG CCGACGACGT GTGGGGCATC
GGCTTCAAAA CCGCCGACAC CATCGCCCAA GCCGTCGGCA TCCCGCACGA CAGCCCCGAA
CGGGTCAAGG CGGGCCTGCG CTACACCCTG TCGCAGGCGG CCGACGACGG CCACTGCTAC
CTGCCGGCCC CCAACCTCGT CGCCGACGCG GTGAAGATCC TGGAGGTCCC GGCCGAGCTG
ACCGTCCGCT GCCTGGAAGA ACTGGTCGCC GAGGAGGGCG TGGTCCGCGA GGAGGTCCCC
GCCGGCGACA GCCTCGTCCC CGCGGTCTAC CTGGTCCCCT TCCACCGCGC CGAGCTGTCG
CTGGCCGGCT CCCTGCGCGC CCTGCTGACC TCCGGCCACG ACCGGCTGGG CGTCTTCGGA
TCGGTGGACT GGCAGGTGGC GCTGGAATGG CTGCACAAGC AGACCGACGC CGAGCTCGCC
CCCGAGCAGG CCCACGCCGT ACGGCTGGCG TTGTGCGAGA AGGTCGCGGT GCTGACCGGC
GGGCCCGGCT GCGGCAAGAG CTTCACCGTG CGCTCCATCG TCACCCTCGC GCGCGCCAAG
AAGGCGAAGG TCATCTTGGC CGCGCCCACC GGCCGGGCGG CCAAGAGGCT CGCGGAGCTG
ACCGGCCACG AGGCCACCAC CGTGCACCGG CTGCTGCAAC TGCGCCCCGG CGGGGACGCC
ACCTTCGACC GCGACAACCC CCTGGACGCC GACCTGGTCG TGGTCGACGA GGCCTCGATG
CTGGACCTGC TGCTGGCCAA CAAACTGGTC AAGGCCATCG CGCCGGGCAC GCACCTGTTG
TTCGTGGGGG ATGTGGACCA GCTGCCCTCG GTCGGCGCCG GCGAGGTGCT GCGGGACCTG
CTGGCCGCCG AGGAGGAGAT CCCCCGGGTA CGGCTGACCC ACATCTTCCG CCAGGCACAG
GAGTCGGGCG TGGTCGTCAA CGCCCACCGC GTCAACACCG GCCTGCCCCC GGCACTGGAG
GGCATGGGCG ACTTCTTCCT GTTCCCGTGC GAGGAGCCGG AGGAGATCGC GGCGCTGACC
GTCGATGTGG TGGCCAACCG GATCCCGCGC AAGTTCGGCC TCAACCCGCG CCGGGACGTG
CAGGTGCTGG CGCCGATGCA CCGGGGCGCC GCGGGGGCGG GCAACCTCAA CAACGCGCTG
CAGGAGGCGC TGACCCCCTC GCGCGAGGGC ATGCCCGAAC GCCGCTACGG CGGCCGTGTC
TACCGGGTCG GCGACAAGGT GACCCAGCTG CGCAACAACT ACGACAAGGG CGCGGCGGGG
GTGTTCAACG GGACCGTGGG CGTGGTGGTC GACATCAAAC CCGACGACCA CAAGCTGACC
GTGCTGACCG ATGAGGACGA GAACGTCGAA TACGCCTTCG ACGAGCTGGA CGAGCTGGCA
CACGCCTACG CGGTGTCCAT CCACCGCTCC CAGGGCAGCG AGTATCCGGC GGTGGTCATC
CCGCTGGCCA CCAGCGCGTG GATGATGCTG CAGCGCAACC TGCTCTACAC CGCGATCACC
CGGGCCAAGA AGCTCGTCGT CATCGTCGGC TCACGCCGGG CGCTGGCCCA GGCGGTGCGC
ACCCGCGGCG CCGGACGGCG TCACACCAGC CTCACCCACC GGCTGCGCTC GCCTTAG
 
Protein sequence
MKPGSGGPSA ASIDAVLERI TYANEETGYT IARVATERSG SDLLTVVGPL LGAQPGESLR 
LTGRWTSHPK YGKQFEVWSY ATVLPATVQG IQRYLGSGLI KGIGPKMAER IVDHFGADTL
QIIETAPERL VEVPGLGPKR TKMIGIAWEE QKIIKEVMIF LQGVGVSTSI AVRIFKQYGD
ASITVVKSEP YRLADDVWGI GFKTADTIAQ AVGIPHDSPE RVKAGLRYTL SQAADDGHCY
LPAPNLVADA VKILEVPAEL TVRCLEELVA EEGVVREEVP AGDSLVPAVY LVPFHRAELS
LAGSLRALLT SGHDRLGVFG SVDWQVALEW LHKQTDAELA PEQAHAVRLA LCEKVAVLTG
GPGCGKSFTV RSIVTLARAK KAKVILAAPT GRAAKRLAEL TGHEATTVHR LLQLRPGGDA
TFDRDNPLDA DLVVVDEASM LDLLLANKLV KAIAPGTHLL FVGDVDQLPS VGAGEVLRDL
LAAEEEIPRV RLTHIFRQAQ ESGVVVNAHR VNTGLPPALE GMGDFFLFPC EEPEEIAALT
VDVVANRIPR KFGLNPRRDV QVLAPMHRGA AGAGNLNNAL QEALTPSREG MPERRYGGRV
YRVGDKVTQL RNNYDKGAAG VFNGTVGVVV DIKPDDHKLT VLTDEDENVE YAFDELDELA
HAYAVSIHRS QGSEYPAVVI PLATSAWMML QRNLLYTAIT RAKKLVVIVG SRRALAQAVR
TRGAGRRHTS LTHRLRSP