Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_4487 |
Symbol | |
ID | 8667781 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | - |
Start bp | 5003625 |
End bp | 5005841 |
Gene Length | 2217 bp |
Protein Length | 738 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | |
Product | Exodeoxyribonuclease V |
Protein accession | YP_003340096 |
Protein GI | 271965900 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00100877 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAAGCCTG GATCGGGTGG TCCCTCTGCC GCGTCCATCG ACGCCGTCCT CGAACGCATC ACCTACGCCA ACGAGGAGAC CGGCTACACC ATCGCCAGGG TGGCCACCGA ACGCTCGGGC AGCGATCTGC TGACCGTCGT CGGGCCGCTG CTGGGCGCCC AGCCCGGCGA GTCGCTGCGG CTGACCGGGC GCTGGACCTC CCATCCCAAG TACGGCAAGC AGTTCGAGGT ATGGTCCTAC GCCACCGTGC TGCCCGCCAC CGTCCAGGGC ATCCAGCGCT ACCTCGGCTC CGGGCTGATC AAGGGCATCG GGCCGAAGAT GGCCGAGCGG ATCGTCGACC ACTTCGGCGC CGACACCCTG CAGATCATCG AGACCGCCCC CGAGCGGCTG GTCGAGGTCC CCGGCCTCGG CCCCAAGCGG ACCAAGATGA TCGGCATCGC CTGGGAGGAA CAGAAGATCA TCAAAGAGGT GATGATCTTC CTTCAGGGAG TCGGCGTCTC GACCTCCATC GCGGTGCGGA TCTTCAAGCA GTACGGCGAC GCCTCCATCA CGGTCGTCAA GAGCGAGCCC TACCGGCTGG CCGACGACGT GTGGGGCATC GGCTTCAAAA CCGCCGACAC CATCGCCCAA GCCGTCGGCA TCCCGCACGA CAGCCCCGAA CGGGTCAAGG CGGGCCTGCG CTACACCCTG TCGCAGGCGG CCGACGACGG CCACTGCTAC CTGCCGGCCC CCAACCTCGT CGCCGACGCG GTGAAGATCC TGGAGGTCCC GGCCGAGCTG ACCGTCCGCT GCCTGGAAGA ACTGGTCGCC GAGGAGGGCG TGGTCCGCGA GGAGGTCCCC GCCGGCGACA GCCTCGTCCC CGCGGTCTAC CTGGTCCCCT TCCACCGCGC CGAGCTGTCG CTGGCCGGCT CCCTGCGCGC CCTGCTGACC TCCGGCCACG ACCGGCTGGG CGTCTTCGGA TCGGTGGACT GGCAGGTGGC GCTGGAATGG CTGCACAAGC AGACCGACGC CGAGCTCGCC CCCGAGCAGG CCCACGCCGT ACGGCTGGCG TTGTGCGAGA AGGTCGCGGT GCTGACCGGC GGGCCCGGCT GCGGCAAGAG CTTCACCGTG CGCTCCATCG TCACCCTCGC GCGCGCCAAG AAGGCGAAGG TCATCTTGGC CGCGCCCACC GGCCGGGCGG CCAAGAGGCT CGCGGAGCTG ACCGGCCACG AGGCCACCAC CGTGCACCGG CTGCTGCAAC TGCGCCCCGG CGGGGACGCC ACCTTCGACC GCGACAACCC CCTGGACGCC GACCTGGTCG TGGTCGACGA GGCCTCGATG CTGGACCTGC TGCTGGCCAA CAAACTGGTC AAGGCCATCG CGCCGGGCAC GCACCTGTTG TTCGTGGGGG ATGTGGACCA GCTGCCCTCG GTCGGCGCCG GCGAGGTGCT GCGGGACCTG CTGGCCGCCG AGGAGGAGAT CCCCCGGGTA CGGCTGACCC ACATCTTCCG CCAGGCACAG GAGTCGGGCG TGGTCGTCAA CGCCCACCGC GTCAACACCG GCCTGCCCCC GGCACTGGAG GGCATGGGCG ACTTCTTCCT GTTCCCGTGC GAGGAGCCGG AGGAGATCGC GGCGCTGACC GTCGATGTGG TGGCCAACCG GATCCCGCGC AAGTTCGGCC TCAACCCGCG CCGGGACGTG CAGGTGCTGG CGCCGATGCA CCGGGGCGCC GCGGGGGCGG GCAACCTCAA CAACGCGCTG CAGGAGGCGC TGACCCCCTC GCGCGAGGGC ATGCCCGAAC GCCGCTACGG CGGCCGTGTC TACCGGGTCG GCGACAAGGT GACCCAGCTG CGCAACAACT ACGACAAGGG CGCGGCGGGG GTGTTCAACG GGACCGTGGG CGTGGTGGTC GACATCAAAC CCGACGACCA CAAGCTGACC GTGCTGACCG ATGAGGACGA GAACGTCGAA TACGCCTTCG ACGAGCTGGA CGAGCTGGCA CACGCCTACG CGGTGTCCAT CCACCGCTCC CAGGGCAGCG AGTATCCGGC GGTGGTCATC CCGCTGGCCA CCAGCGCGTG GATGATGCTG CAGCGCAACC TGCTCTACAC CGCGATCACC CGGGCCAAGA AGCTCGTCGT CATCGTCGGC TCACGCCGGG CGCTGGCCCA GGCGGTGCGC ACCCGCGGCG CCGGACGGCG TCACACCAGC CTCACCCACC GGCTGCGCTC GCCTTAG
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Protein sequence | MKPGSGGPSA ASIDAVLERI TYANEETGYT IARVATERSG SDLLTVVGPL LGAQPGESLR LTGRWTSHPK YGKQFEVWSY ATVLPATVQG IQRYLGSGLI KGIGPKMAER IVDHFGADTL QIIETAPERL VEVPGLGPKR TKMIGIAWEE QKIIKEVMIF LQGVGVSTSI AVRIFKQYGD ASITVVKSEP YRLADDVWGI GFKTADTIAQ AVGIPHDSPE RVKAGLRYTL SQAADDGHCY LPAPNLVADA VKILEVPAEL TVRCLEELVA EEGVVREEVP AGDSLVPAVY LVPFHRAELS LAGSLRALLT SGHDRLGVFG SVDWQVALEW LHKQTDAELA PEQAHAVRLA LCEKVAVLTG GPGCGKSFTV RSIVTLARAK KAKVILAAPT GRAAKRLAEL TGHEATTVHR LLQLRPGGDA TFDRDNPLDA DLVVVDEASM LDLLLANKLV KAIAPGTHLL FVGDVDQLPS VGAGEVLRDL LAAEEEIPRV RLTHIFRQAQ ESGVVVNAHR VNTGLPPALE GMGDFFLFPC EEPEEIAALT VDVVANRIPR KFGLNPRRDV QVLAPMHRGA AGAGNLNNAL QEALTPSREG MPERRYGGRV YRVGDKVTQL RNNYDKGAAG VFNGTVGVVV DIKPDDHKLT VLTDEDENVE YAFDELDELA HAYAVSIHRS QGSEYPAVVI PLATSAWMML QRNLLYTAIT RAKKLVVIVG SRRALAQAVR TRGAGRRHTS LTHRLRSP
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