Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_4486 |
Symbol | |
ID | 8667780 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | + |
Start bp | 5002900 |
End bp | 5003628 |
Gene Length | 729 bp |
Protein Length | 242 aa |
Translation table | 11 |
GC content | 78% |
IMG OID | |
Product | putative transcriptional regulator, ArsR family |
Protein accession | YP_003340095 |
Protein GI | 271965899 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.000320614 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACAGCTA CGACGCCGAT CCCGCTGGCC ACGCTGGCCG GGCTACTCGC CGACGCCACC CGCGCGCAGT TCTGCCTGGC CCTGCTGGAC GGGCGCGCCT GGACCGCCGG GGAGCTGGCC AGGCACGCCG GGGTGGCGGC CTCCACGGCC AGTGAGCACC TGTCGCACCT GGTGCAGGGC GGGCTGCTGG CCGAGGAGCG CCAGGGACGC CACCGGTATC TGCGGCTCGC CGGGCCGCAG GTGGCCCAGC TCATCGAGGA CATGACGGCC CATGCCGAGC GCGCCGGGGC CGCCGCCCGG CCGCCGACGC TGCGCGCGGC GAGCGCGGCC AGGGCGATGG CCGCCGCGCG TACCTGTTAC GACCACCTGG CCGGGCGGCT CGGCGTGGCG ATCACCGACG CGCTCACCAC GCGGGGGCTG CTGCGCCAGG ACGCCGGCTT CGCCCTCAGC GACGACGGGC TGGCGTGGTT CGAGGCGGAG CTGCGGGTGA GCCTGCCCTC CCCCACCGGC AGGCGCCCCC TGGTCCGGCC CTGCCTGGAC TGGACCGAGC GCCGCCATCA CCTGGCCGGC GCCGCGGGGG CCGTGCTCTG CGCGACCGCG CTGGAACGCC GGTGGGTCAG CCGGATCGGC TCCGGCCGCG CGCTGCGCCT CACCGGGACC GGCCGGCGGG CCCTGGGCGA GCTGCTGGGC CTGCAGGACC CCACCGGCGA GCTCGCCGGC GACCTCTAA
|
Protein sequence | MTATTPIPLA TLAGLLADAT RAQFCLALLD GRAWTAGELA RHAGVAASTA SEHLSHLVQG GLLAEERQGR HRYLRLAGPQ VAQLIEDMTA HAERAGAAAR PPTLRAASAA RAMAAARTCY DHLAGRLGVA ITDALTTRGL LRQDAGFALS DDGLAWFEAE LRVSLPSPTG RRPLVRPCLD WTERRHHLAG AAGAVLCATA LERRWVSRIG SGRALRLTGT GRRALGELLG LQDPTGELAG DL
|
| |