Gene Sros_4486 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_4486 
Symbol 
ID8667780 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp5002900 
End bp5003628 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content78% 
IMG OID 
Productputative transcriptional regulator, ArsR family 
Protein accessionYP_003340095 
Protein GI271965899 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000320614 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGCTA CGACGCCGAT CCCGCTGGCC ACGCTGGCCG GGCTACTCGC CGACGCCACC 
CGCGCGCAGT TCTGCCTGGC CCTGCTGGAC GGGCGCGCCT GGACCGCCGG GGAGCTGGCC
AGGCACGCCG GGGTGGCGGC CTCCACGGCC AGTGAGCACC TGTCGCACCT GGTGCAGGGC
GGGCTGCTGG CCGAGGAGCG CCAGGGACGC CACCGGTATC TGCGGCTCGC CGGGCCGCAG
GTGGCCCAGC TCATCGAGGA CATGACGGCC CATGCCGAGC GCGCCGGGGC CGCCGCCCGG
CCGCCGACGC TGCGCGCGGC GAGCGCGGCC AGGGCGATGG CCGCCGCGCG TACCTGTTAC
GACCACCTGG CCGGGCGGCT CGGCGTGGCG ATCACCGACG CGCTCACCAC GCGGGGGCTG
CTGCGCCAGG ACGCCGGCTT CGCCCTCAGC GACGACGGGC TGGCGTGGTT CGAGGCGGAG
CTGCGGGTGA GCCTGCCCTC CCCCACCGGC AGGCGCCCCC TGGTCCGGCC CTGCCTGGAC
TGGACCGAGC GCCGCCATCA CCTGGCCGGC GCCGCGGGGG CCGTGCTCTG CGCGACCGCG
CTGGAACGCC GGTGGGTCAG CCGGATCGGC TCCGGCCGCG CGCTGCGCCT CACCGGGACC
GGCCGGCGGG CCCTGGGCGA GCTGCTGGGC CTGCAGGACC CCACCGGCGA GCTCGCCGGC
GACCTCTAA
 
Protein sequence
MTATTPIPLA TLAGLLADAT RAQFCLALLD GRAWTAGELA RHAGVAASTA SEHLSHLVQG 
GLLAEERQGR HRYLRLAGPQ VAQLIEDMTA HAERAGAAAR PPTLRAASAA RAMAAARTCY
DHLAGRLGVA ITDALTTRGL LRQDAGFALS DDGLAWFEAE LRVSLPSPTG RRPLVRPCLD
WTERRHHLAG AAGAVLCATA LERRWVSRIG SGRALRLTGT GRRALGELLG LQDPTGELAG
DL