Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_4481 |
Symbol | |
ID | 8667775 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | + |
Start bp | 4998620 |
End bp | 5000269 |
Gene Length | 1650 bp |
Protein Length | 549 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | |
Product | Serine phosphatase RsbU regulator of sigma subunit-like protein |
Protein accession | YP_003340091 |
Protein GI | 271965895 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00461161 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.901449 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGCGA CACGGCCCGC CGGCGACACC GATCGCAGAC GACAGAGCAC CCACGCGGCG CACGACGCCC CCGGTGGACC GGGGGAGGAA CTGCTGCGCG CCATCGTGGA GGCCAGCGGC GAGGGCGTGG TGCTCTGCGA CACCGACGGT GTCGTCGTCA TGGTCAACGC CGCGGCGGCG CGGATGGCGC CGGAGATCGT GCCCGGCCGG CCCGCGGCCT CGGGCGGTGC GGCGGCGCTG TTCGGCCACG ACCACCCCGA GGGCGACAGC AGGGAGGTCG GCCGCGGCGA CCTGCGGCTG CGGGTGCGCC GGGAGGCCTT CGGCGTCGCC CACCACGCCT GGTACCTGCG CGACGTCACC GCCGAGTCGG CCAGGACCGA CGCGCTGCTG GCCGAGCGCC GGCGTACCGA GTTCCTGGTG GAGGCCGGGC GGCGGCTGTC GGCCTCGCTC AACACGCGCC GCTGCGCGCG TACCGCGGTC GAGCTCGCCG TCTCCTTCCT GGCCGATGCC GCCATGGTCG TGCTGCCGCC CGCCGGGCGC CGCCAGGCGG GCTGGCTGCG CTCGGTCGCC GGGCAGCACA GTCTGCAGGA GGGCGCGGTC CCCGCGGCCT CCACCGCGCA GGTGCCGGGC CTGGCCGAGG CGCTGGCGGG TTTCCCGCCG GTGCCCAGCC GGTGGCTGGA TCCCGGCCAG GCCCCCCAGT GGCTTTTGCC CGAGGGGTTC GGCCAGGCCG GTCACCTGCT CGTCACCCCG CTGCCCGGCA ACGGCGTCCC GGCCGGGGCG CTGGTGCTGG CCCGCCGCGA GGGCGGACCG GCCTTCGACG AGGAGGCCGA GATCCTGGTG CGGGTCTTCG CCGCCCGCGC GGGCGCGGCG ATCTCGGCCG CCGCCCTGTA CCAGGAGCAG AGCGCCACCA ACGCGATCTT GATCAGGGAC CTGCTGCCGC CCGCCCTGCC CGCCCTGGCC GGGATGGAGC TGGCCGGCTC GTTGCGCTCG GCCCAGCAGG CCGGGCTGAT CGGCGGTGAC TTCTACGACC TCTACCTGCC CGCCCCCGGC GCCCCGGGCG AGCCGCTGGT GGTCCTGGGC GACGTCTGCG GCAAGGGGGC GCGCGCCGCC GTCCTGGCCG GGCAGGTCCG CCAGTCCCTG CGCACGCTGC TGCTGCTGGA AAGGCGCCCC GAGCGGCTGA TGTCGCTGCT CAACCGCTCC CTGCTGGCCT CCCCCTCGCC CAACCCCTAC GTCACCCTCG TGCTGGGCGC GCTGCGGGCC GGGCAGCGGG GCCACGTGCT GCTGGATTTG GCCGTGGCCG GGCATCCCCC GCCGCTCATC CTGCGCCGGG ACGGCACCGT GCAGGAGGCA GGCGCCGGCG GCTCCCTGCT CGGCGCGCTG CAGGAGACCG TCTTGACCCC GGTCACCGTC GACCTGGCCC CCGGCGAGAT GTGCCTGCTC TACAGCGACG GCATCACCGA GGCCGTCGGC GGTCCCACCG GCCGGGAGAT GTACGGCGGG CAGCGGCTCA AGAACGCCCT GTCCACCTGC GCGGGCATGC CGGTCTCGGC GGCGGTGGAG CGGCTGGAGC AGATCAGCAC CGAATGGCTG GCCGGCGACG TCCAGGACGA CCGGGCGCTG CTCGCCGTAC AGGCCAGGCC CGCGCGATGA
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Protein sequence | MTATRPAGDT DRRRQSTHAA HDAPGGPGEE LLRAIVEASG EGVVLCDTDG VVVMVNAAAA RMAPEIVPGR PAASGGAAAL FGHDHPEGDS REVGRGDLRL RVRREAFGVA HHAWYLRDVT AESARTDALL AERRRTEFLV EAGRRLSASL NTRRCARTAV ELAVSFLADA AMVVLPPAGR RQAGWLRSVA GQHSLQEGAV PAASTAQVPG LAEALAGFPP VPSRWLDPGQ APQWLLPEGF GQAGHLLVTP LPGNGVPAGA LVLARREGGP AFDEEAEILV RVFAARAGAA ISAAALYQEQ SATNAILIRD LLPPALPALA GMELAGSLRS AQQAGLIGGD FYDLYLPAPG APGEPLVVLG DVCGKGARAA VLAGQVRQSL RTLLLLERRP ERLMSLLNRS LLASPSPNPY VTLVLGALRA GQRGHVLLDL AVAGHPPPLI LRRDGTVQEA GAGGSLLGAL QETVLTPVTV DLAPGEMCLL YSDGITEAVG GPTGREMYGG QRLKNALSTC AGMPVSAAVE RLEQISTEWL AGDVQDDRAL LAVQARPAR
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