Gene Sros_4480 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_4480 
Symbol 
ID8667774 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp4997019 
End bp4998197 
Gene Length1179 bp 
Protein Length392 aa 
Translation table11 
GC content67% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003340090 
Protein GI271965894 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0734877 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.829072 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGACGC CGCTGGCCGG ACTGGCGGTG GCGGCAGCGG CCATGCTGGT CGCCTCCTGC 
TCCGGCGGGT CGTCCTCGAC GGCCCCCGCC GCCGACGGTG GCGGCGGCAA CACCGATGTG
AAGTCCACCC CGGCCACACC GGTCATAAAG ATCAGCCCGG CCGAGGGCAG CGCGACCGTG
CGCCCGGACA AGCGGGTCGT CGTCACCGCC GCCAACGGCT CACTCGAACA GGTCACCGTG
GAGAGCGGCG GCACGCCGCT GCCGGGCACC TTTGACGCCA AACGCACCAA ATGGGTGTCC
AAGGCCCCGT TGAAGCCCTC CAGCAAGTAC ACCGTCTCGG CGCGCGCGGT GGGCGGCACC
ACCGCCAGCA GCTCCTTCAA GACGCTCAAG CCCAAGGTCG AGCTGGCGGT GGCCGACGTG
ACCCCGGCAC TGAAGGGGGA GAAGGTCGGC GTGGGGGCGC CGATCATCGT CACCTTCAAC
CAGCCCGTCA CCCAGAAGGC CGACGTGGAA CAGGCCCTGG AGGTGGAGTC GGAGAAGCCC
TCCCAGGGTG CCTGGCGGTG GATCAACGAC ACCACGGTGA TCTACCGGAC CGCCAAGTTC
TGGCAGCCCC ACCAGAAGGT GACCTTCACC GCCCGCCTCA ACGGCGTCCA GGGCGGCAAG
GACATGTACG GGGTCGAGGA CTTCACCAAG AGCATCCGGA TCGGCGCCGC CCAGATCGCC
ACCATCGACA CCCGCAAACA CAAGATGATC GTCAAGCGGG ACGGCAAGGT CGTGCAGACC
ATGCTCATCA GCGCCGGCAA CGCCAGCACC CGCGAATACA CCACCACCAG CGGCGTCCAC
CTGGCGATGG GCAAGGCCAA CCCCGAGCGG ATGATCTCAC CCGGCCGCAA GAAGGGCGAC
CCGGGCTACT ACGACCTCAT GATCAACCAC GCGGTGCGCT TCTCCAACAG CGGCGAATAC
GTCCACGCGC TCAACAACGT CTGGGCCCAG GGCCGCCAGA ACGTCAGCCA CGGCTGCATC
AACTCCCGCC CCGACCAGGC CAGGTGGTAC TACAACCAGG TCCAGCGCGG CGACGTGATC
ACCATCACCG GCACCAACCG GGAGATGGAG TGGAACAACG GCTGGGGATT CTGGCAGATG
CCGTTCAAGC AGTGGAAGAA GGGCAGCGCC CTGGCCTGA
 
Protein sequence
MRTPLAGLAV AAAAMLVASC SGGSSSTAPA ADGGGGNTDV KSTPATPVIK ISPAEGSATV 
RPDKRVVVTA ANGSLEQVTV ESGGTPLPGT FDAKRTKWVS KAPLKPSSKY TVSARAVGGT
TASSSFKTLK PKVELAVADV TPALKGEKVG VGAPIIVTFN QPVTQKADVE QALEVESEKP
SQGAWRWIND TTVIYRTAKF WQPHQKVTFT ARLNGVQGGK DMYGVEDFTK SIRIGAAQIA
TIDTRKHKMI VKRDGKVVQT MLISAGNAST REYTTTSGVH LAMGKANPER MISPGRKKGD
PGYYDLMINH AVRFSNSGEY VHALNNVWAQ GRQNVSHGCI NSRPDQARWY YNQVQRGDVI
TITGTNREME WNNGWGFWQM PFKQWKKGSA LA