Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_4464 |
Symbol | |
ID | 8667758 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | - |
Start bp | 4975558 |
End bp | 4978806 |
Gene Length | 3249 bp |
Protein Length | 1082 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | |
Product | LuxR family transcriptional regulator |
Protein accession | YP_003340075 |
Protein GI | 271965879 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.0122059 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCGGCTTC GCGTCACGCT GCTCGGCACC TTTCAGGCCT CCCGTGGTGA CGCCGCCCTG CCCGTCCGGG GTGCGCGGTT GCAGGGTCTG GTCGTACGGC TGGCGCTCGC CGGCGGGCGC GCCGTCGAGC AGGGCGTCCT GGTCGACGCG ATCTGGGCCG AGGACCCGCC GACCGGCCCC GCCCACGCCC TGCAGGCCCT CGTCTCGCGG CTGCGCCGGA CCCTCGGCCC GGCCGGCGAC ATCGCGCAGG TCGCGGGCGG CTACCGGCTG GAGGTGGACG CCGCCGACGT GGACGCACTG CGGTTCGAGC GGCTCGCCGC CGCCGGCCGT GACCGGCTGC GCGCCGGCGA CCCGAATGCC GCGGCGGTCG TGCTCGGCGA GGCCGTGGCA CTGTGGGGCG ACCGTCCCGG CACCGAGCCC ACGGTCATCG CCGCGGTAGC GCCCGCCGCC GCGACCCGGC TGGCCCACGC CTCGCTCGAG GCCGTCACCG ACCTCGCCGC CGCCGAGCTG ACCCTGGGCC GTGCCGACGC GGCCGCCGCC CGCCTGAGCG CCCTGCTCGC CGAGCACCCC GTCCACGAGC GCGCCGCCGC GCTGCTCATG GACGCGCTCA CCGCCCAGGG ACGCCAGGCC GAGGCCCTGG CCCTGTACGA GCGGGTCCGC GAAACCCTGG CCGACGTCCT CGGCACCGAC CCGGGCTCCG CCCTGCGCGA GCGCCACGTG CGCCTGCTGC GCGCCGAACG GCCCGCCCCG GCCGCCGACG CCGCCCAGAC CAGGCCGAAT AACCTGCCCG CACCGCTGAC CAGCTTCATC GGGCGCGACG ACGATCTGGC CCGGATCGAC ACGCTGCTCA CCACCGGACG CCTGGTCACC GTGCTCGGTC CCGGCGGCGC CGGCAAGACG CGCCTCGCCG TCGAGGCCGC CCGCCGCCAC CGCCACGAGT ACCGCGACGG CGCCTGGATG ATCGACCTCG CCTCGGTCAT CGAACCGGCC AAGGTCGGCG CGGCCGTGCT CGCCGGGATC GGGCTGCGCG GCGGCGCGAT GTTCGAGGCC CGGGTGCGCA TCGAGGGCGA CGAACTGGAC GTGCTCGCCG ACCAGCTCGG CGGCCGGGAG AGCCTGCTGC TGATCGACAA CTGCGAGCAC CTGATCGACG CCGTGGCCCA CCTGGTCGCG GCACTGCTGT CCCGCTGCTG CGGGCTGCGC GTGCTCGCCA CCAGCCGCGA GCCCCTCGCG GTCGACGGCG AGGCACTGGT GCCGCTCGGC CCGCTCGCGC TGCCCGGACC GGACGACGGC GTCGAACAGG CCCGGCGGGC GGCGTCGGTA CGCCTGTTCA CCGAGCGGGC CGCAGCCGTA CGCCCCGGCT TCGAGGTGGA GGAGACGACG CTGCCCGAGG TCCTGCGGGT GGTCCGCGGC CTGGACGGGC TGCCGCTGGC GCTGGAGCTG GCCGCGGCCC GGCTGCGGAC GCTGTCGCTG CCCGAGCTGG CCGACGGGCT GTCGGACCGG TTCCGGCTGC TGACCACCGG CAACCGCACC GCGCTGCCCC GGCACCGCAC GCTGCGCGCG GTCATCGCCT GGAGCTGGCA ACTGCTGAGC GAGCACGAGC GTACGGTCGC CGAACGCGTC TCGATCCTGC CCGGCGGCGT CACGCCGGCC TCGGCCACCG CGCTCTGCGC CGGCACCGCC GTACCGGCCG CCGAGATCCC CGAGCTGCTC GCCGGCCTGG TCGACCGATC GCTGCTGCAG CTCGCGCCCG ACCCGGGCCG CTACCGCATG CTGGAGACGC TGCGCGAGTA CGGCACCGAC CGCCTGGCCG CGACGGGCGA CCTCGCCACC GTCCGCGACC TGGCCGCCGA CCACTTCGCC GAGCTGACGG CCCGCTACGA CCCGCAACTG CGCGGGCCCG GCCAGCTGAC GGCCATGCGA GTCATCGGCG CCGAATACGA CAACGCGCTG GCCGCCCTGC GCAGACGGTG CGACACCGGC GACGCCTCCG GCGCGGTCGC TCTCGCCCTG AACCTGACCT GGTACTGGCA CATGTTCGGC CGGCACCCCG ACGCGGCCTA CTGGCTGGGC GAGGCACTGG CGGTGCCCGG CGGCGAGCCG ACACCCGAGC GCGACTGCGC TCAGGTGATC TCCTTGATCG ACCGGGTCGG CACCTGGCCG GGGAGGTCCG CCGAGGAGAC CGCGGACGAC CAGGCACGGA TACGCGAGCC GGCCGACCGG CTGCTCACCT ACCCGCAGCT GCCGGGTCCG TACGGCGCGC TCACCGCGCT CACGCTCGCG TTCCTGCAGG AGGAGGAGGC CGCGTTCGCG ATCATCGAGC GCCTGGCCGA CGGCGACGAC GTCTGGTTGT CCGGGCTGGC CCGCATGTTC CGGGCCCAGT TCGCCGAGAA CGCGGGCGAG CTCGACAGGA CGCGTCCCGA CGTGGAGGCG GCCCTGGCCT GCTTCCGGCA GGCCGGCGAC CGCTGGGGCC AGGCCACCGT GCTGCCGATG CGCACCCAGC TACGGCAGTA CGACGACGAC CTCGACCGCG CGCTGGCCGA CCTGCGCCAG GCCCGGTCGC TGGCCGGCGA GTTCGGCTCG CTCAACCTCG GCGACGAGGT GTTCATGGAC GTGCGCTGGA TCGACCTGCA CCTGCGGCGC GGCGACACCG ACCTGGCGAT CGCGGTCATC GGCCCGGCCC GGGAGCGGGC GCTGCGCGCG AACTCGCCGG GGATGCCGGC CCTGGTCGAC GCGTGGGAGG CCGTCTTCCG GGTGCGGCTG GGCGACCTGG ACCGGGCGCG GGAACTGCTC GACGACGCCG AACGGGGCCT GCGCGGCGAC ACCACCTTCC CCGGTGGCCA CGCGCGGACG CTGGTCGGCG GCGTACGGGC CTCGCTCTGC CTGGAGACCG GTGACCTGGC CGGCGCGCAG AAGGCGCTGG AGAAGGCGTA CGCGGCGGCG CTGGAGACCC GGGACCTGCC GATCCTGTCG CTGGTGGCGG TGAACGCCGC CGCACTCGCC GAGGCACACG GACGGCATCA GGACTCGGCC GTCCTGCTCG GCGCCGCCTC CCGGCTGCGC GGCGCTCACG ACCACACCCA TCGGCAGGTC CGCGAGCTCA CCCGCCGAGG GCGGGCCGCG CTGGGCGAGG AAGCCTTCGC CGCGGCGTAC GGGAAGGGGT GGAAGCTGGA CGGGAAGACG GCCGTGACCG AAGTCGACCC GGCCCGGCTA CACCGGGAAC TCAGGACGGC TCACCCGGAT CCCTGGTGA
|
Protein sequence | MRLRVTLLGT FQASRGDAAL PVRGARLQGL VVRLALAGGR AVEQGVLVDA IWAEDPPTGP AHALQALVSR LRRTLGPAGD IAQVAGGYRL EVDAADVDAL RFERLAAAGR DRLRAGDPNA AAVVLGEAVA LWGDRPGTEP TVIAAVAPAA ATRLAHASLE AVTDLAAAEL TLGRADAAAA RLSALLAEHP VHERAAALLM DALTAQGRQA EALALYERVR ETLADVLGTD PGSALRERHV RLLRAERPAP AADAAQTRPN NLPAPLTSFI GRDDDLARID TLLTTGRLVT VLGPGGAGKT RLAVEAARRH RHEYRDGAWM IDLASVIEPA KVGAAVLAGI GLRGGAMFEA RVRIEGDELD VLADQLGGRE SLLLIDNCEH LIDAVAHLVA ALLSRCCGLR VLATSREPLA VDGEALVPLG PLALPGPDDG VEQARRAASV RLFTERAAAV RPGFEVEETT LPEVLRVVRG LDGLPLALEL AAARLRTLSL PELADGLSDR FRLLTTGNRT ALPRHRTLRA VIAWSWQLLS EHERTVAERV SILPGGVTPA SATALCAGTA VPAAEIPELL AGLVDRSLLQ LAPDPGRYRM LETLREYGTD RLAATGDLAT VRDLAADHFA ELTARYDPQL RGPGQLTAMR VIGAEYDNAL AALRRRCDTG DASGAVALAL NLTWYWHMFG RHPDAAYWLG EALAVPGGEP TPERDCAQVI SLIDRVGTWP GRSAEETADD QARIREPADR LLTYPQLPGP YGALTALTLA FLQEEEAAFA IIERLADGDD VWLSGLARMF RAQFAENAGE LDRTRPDVEA ALACFRQAGD RWGQATVLPM RTQLRQYDDD LDRALADLRQ ARSLAGEFGS LNLGDEVFMD VRWIDLHLRR GDTDLAIAVI GPARERALRA NSPGMPALVD AWEAVFRVRL GDLDRARELL DDAERGLRGD TTFPGGHART LVGGVRASLC LETGDLAGAQ KALEKAYAAA LETRDLPILS LVAVNAAALA EAHGRHQDSA VLLGAASRLR GAHDHTHRQV RELTRRGRAA LGEEAFAAAY GKGWKLDGKT AVTEVDPARL HRELRTAHPD PW
|
| |