| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_4451 |
|---|
| Symbol | |
|---|
| ID | 8667745 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | + |
|---|
| Start bp | 4965044 |
|---|
| End bp | 4965529 |
|---|
| Gene Length | 486 bp |
|---|
| Protein Length | 161 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | |
|---|
| Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
|---|
| Protein accession | YP_003340064 |
|---|
| Protein GI | 271965868 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.0000179567 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.000784643 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | GTGAGACAGC ATCCCTTCGA AAAGATCGTG GCTGAGCACG GGCCGACGGT GCTGCGCGTG
TGCCGCGCCG TCCTCGGCCC CACCGCCGCC GCCGAAGACG CCTGGTCGGA GACGTTCCTT
TCCGCGATGC AGGCATACCC GGCCCTGCGA GCACACAGCA ACATCGAAGC GTGGCTGGTC
ACCATCGCCC ACAGAAAAGC CATCGACCAG CTACGGGCCG AGACCCGGCG GGCGATCCCC
ACCGACAACC TGCCGGAGAA ACCAGCCAAG GACGGCGTAC CCGGCGACGA GGAGTCACAG
CTGTGGAACG CACTGCACGC ACTGCCTCTC AAGCAACGCC AGACCATCGC CTACCACTAC
CTGGCCGGCC TGCCCTACGC CGAAGTCGCC CAGGTCCTGG GCGGCAGCCC CCAGGCCGCC
AGAAGAGCCG CCGCCGACGG CATCGCCACC CTGCGCAAGA CCTACCCCGA AGGAGAGGAC
CGATGA
|
|---|
| Protein sequence | MRQHPFEKIV AEHGPTVLRV CRAVLGPTAA AEDAWSETFL SAMQAYPALR AHSNIEAWLV
TIAHRKAIDQ LRAETRRAIP TDNLPEKPAK DGVPGDEESQ LWNALHALPL KQRQTIAYHY
LAGLPYAEVA QVLGGSPQAA RRAAADGIAT LRKTYPEGED R
|
|---|
| |