| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_4450 |
|---|
| Symbol | |
|---|
| ID | 8667744 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | + |
|---|
| Start bp | 4964584 |
|---|
| End bp | 4965000 |
|---|
| Gene Length | 417 bp |
|---|
| Protein Length | 138 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | |
|---|
| Product | putative very short patch repair protein |
|---|
| Protein accession | YP_003340063 |
|---|
| Protein GI | 271965867 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.0000172417 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.000789657 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCAGGCCA ACAGATCACG CGACACCAGA CCCGAACTCG CGATCCGCCG CGCCCTGCAC
GCCATGGGCC TGCGCTACCG CGTGGCCAGG CGCCCCCTGC CGCACCTGCG CCGCACCGCC
GACCTCGTCT TCGGACCAGC CAAGATCGCC GTCTTCGTCG ACGGATGCTT CTGGCACCGC
TGCCCCGACC ACTACGCACC ACCCGCCTCC AACCGGGCCT ACTGGAAAGC CAAGATCGAC
ACCAACACCG CCCGCGACAG CCAGACCACC ACCACCCTGC AGCAAGCCGG ATGGACGGTC
ATGCGGTTCT GGTCACACGA AGACCCCTCC GACGTCGCCG CCCGGGTAGC CGCCCAGGTC
CGCTCCCAGC AGCCGGCCCC GCGCCCCGCC GCCCAGCGAC AAGGACAACT CTTTTGA
|
|---|
| Protein sequence | MQANRSRDTR PELAIRRALH AMGLRYRVAR RPLPHLRRTA DLVFGPAKIA VFVDGCFWHR
CPDHYAPPAS NRAYWKAKID TNTARDSQTT TTLQQAGWTV MRFWSHEDPS DVAARVAAQV
RSQQPAPRPA AQRQGQLF
|
|---|
| |