Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_4443 |
Symbol | |
ID | 8667737 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | - |
Start bp | 4959302 |
End bp | 4959943 |
Gene Length | 642 bp |
Protein Length | 213 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | |
Product | alkylated DNA repair protein |
Protein accession | YP_003340056 |
Protein GI | 271965860 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.000774042 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.000155018 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGCCCGGCG TGGACGCGTT GATCGGCCGC TGCCGCGCCG AGATCGCCCC GGGCGCGGTT CACGTGCCCG ACTGGCTGAG CCCCGCCCGG CAACGGCAGC TGGTGCGGGC CTGCCGCGCC TGGGCGCGCC CGCCGCTGGG GATGGAGCGC ATCCGGCTGC CCGGCGGCGG CCTGATGTCG GTGCGCACCG TGTGCCTGGG CCGGCGCTGG CGCCCCTACC GCTACACCGA CGAGCCGGTC GAACCGCTGC CGCAGTGGCT GGCGGAGCTG GGCCGCGCGG CGGTGGCCCA GACCCTCGGC GGCCCCTACG AGCCGGACGT GGCGCTGGTC AACTTCTACG ACGACGCGGC CACGATGGGC ATGCACCAGG ACAGGGACGA GCGCGCCGCG GCTCCGGTGG TCTCCTTGAG CCTGGGAGAC GCGTGCGTGT TCCGGTTCGG CAACACCGCC ACCCGCGCCA GGCCCTGGAG CGATGTCCGG CTGGAGTCGG GCGACCTGTT CGTCTTCGGC GGGCCCTCCC GCCTGGCCTT CCACGGCGTG CGGCGGATCC TGCCCGGGAC CGGCCCGCAC GACCTGATCC AGGGACGGCT CAACATCACG CTGCGCCAGT CGGGCCAGGG GTTGTCCGGC GGCCTGCCGT AG
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Protein sequence | MPGVDALIGR CRAEIAPGAV HVPDWLSPAR QRQLVRACRA WARPPLGMER IRLPGGGLMS VRTVCLGRRW RPYRYTDEPV EPLPQWLAEL GRAAVAQTLG GPYEPDVALV NFYDDAATMG MHQDRDERAA APVVSLSLGD ACVFRFGNTA TRARPWSDVR LESGDLFVFG GPSRLAFHGV RRILPGTGPH DLIQGRLNIT LRQSGQGLSG GLP
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