Gene Sros_4443 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_4443 
Symbol 
ID8667737 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp4959302 
End bp4959943 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content75% 
IMG OID 
Productalkylated DNA repair protein 
Protein accessionYP_003340056 
Protein GI271965860 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000774042 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000155018 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGCCCGGCG TGGACGCGTT GATCGGCCGC TGCCGCGCCG AGATCGCCCC GGGCGCGGTT 
CACGTGCCCG ACTGGCTGAG CCCCGCCCGG CAACGGCAGC TGGTGCGGGC CTGCCGCGCC
TGGGCGCGCC CGCCGCTGGG GATGGAGCGC ATCCGGCTGC CCGGCGGCGG CCTGATGTCG
GTGCGCACCG TGTGCCTGGG CCGGCGCTGG CGCCCCTACC GCTACACCGA CGAGCCGGTC
GAACCGCTGC CGCAGTGGCT GGCGGAGCTG GGCCGCGCGG CGGTGGCCCA GACCCTCGGC
GGCCCCTACG AGCCGGACGT GGCGCTGGTC AACTTCTACG ACGACGCGGC CACGATGGGC
ATGCACCAGG ACAGGGACGA GCGCGCCGCG GCTCCGGTGG TCTCCTTGAG CCTGGGAGAC
GCGTGCGTGT TCCGGTTCGG CAACACCGCC ACCCGCGCCA GGCCCTGGAG CGATGTCCGG
CTGGAGTCGG GCGACCTGTT CGTCTTCGGC GGGCCCTCCC GCCTGGCCTT CCACGGCGTG
CGGCGGATCC TGCCCGGGAC CGGCCCGCAC GACCTGATCC AGGGACGGCT CAACATCACG
CTGCGCCAGT CGGGCCAGGG GTTGTCCGGC GGCCTGCCGT AG
 
Protein sequence
MPGVDALIGR CRAEIAPGAV HVPDWLSPAR QRQLVRACRA WARPPLGMER IRLPGGGLMS 
VRTVCLGRRW RPYRYTDEPV EPLPQWLAEL GRAAVAQTLG GPYEPDVALV NFYDDAATMG
MHQDRDERAA APVVSLSLGD ACVFRFGNTA TRARPWSDVR LESGDLFVFG GPSRLAFHGV
RRILPGTGPH DLIQGRLNIT LRQSGQGLSG GLP