Gene Sros_4406 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_4406 
Symbol 
ID8667700 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp4917370 
End bp4918185 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content72% 
IMG OID 
Producthydrolase 
Protein accessionYP_003340025 
Protein GI271965829 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.018151 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACAGCG CACAGGTCCT TTCCGACGGC TCCCGCATCC GCTGGGTCGA GATACCCGGC 
GTCGAGCCCG TCCTCGTCTT CGTTCACGGG CTCGGCGCCA GCTCCGCCCC CTACTTCGCC
CCGGCAACGG CGCACCCGGC CCTCGCCGGG CGCCGGACCC TCATGATCGA CATGCTGGGC
TTCGGGATCA GCGACCGTCC CGCCGACCTG GCCTACACCC TGGAAGAGCA CGCCGACGCC
CTGGCCGCCG CGCTGGACCA GGCCGCGGTG GGCGCGGCGG ATGTCGTCGC ACACAGCATG
GGCGGCGCGG TCGCCGTCAC GCTGGCCGCC CGCCATCCGC ACCTGGTCGG ACGGCTGGTC
CTGGTCGACG CCAACCTTGA CCCCCTGCCG CCACCGCAGG CCAAGCGGCC GGGCAGCTCC
GGCATCGCCG TCTACCGCAC GGAGCAGGAG TTCCTTGACC GCGGCTGGAA CGAGACCATG
GACTTCGTCG GCCCGTTCTG GGCGGCGACG ATGCGTCTGG CCGGGCCGGA GGCGCTCTAT
CGCAGTGCGA TGAATCTCCT GCGCGGCACC GTTCCGACGA TGCGGGAGAA CCTGGAGAAG
CTGCCGATCC CGCGGACCTT CCTCTATCCG GCCGGAGACG GCCCGCGTGC CGACGCCGAC
AGCCTCACCG CCTCCGGGGT CTCCGTCGTG GACATCCCCG ACTGCGGGCA CAACATCATG
GTGGACAACC CCGACGGGTT CGCCAGGGCC GTCGCCCAGG CGCTGAACGA GCAAGCGGTG
GCATGCCCAG CCGCCCCGGC CGCCGCCAGG GCCTGA
 
Protein sequence
MHSAQVLSDG SRIRWVEIPG VEPVLVFVHG LGASSAPYFA PATAHPALAG RRTLMIDMLG 
FGISDRPADL AYTLEEHADA LAAALDQAAV GAADVVAHSM GGAVAVTLAA RHPHLVGRLV
LVDANLDPLP PPQAKRPGSS GIAVYRTEQE FLDRGWNETM DFVGPFWAAT MRLAGPEALY
RSAMNLLRGT VPTMRENLEK LPIPRTFLYP AGDGPRADAD SLTASGVSVV DIPDCGHNIM
VDNPDGFARA VAQALNEQAV ACPAAPAAAR A