Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_4380 |
Symbol | |
ID | 8667674 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | + |
Start bp | 4890100 |
End bp | 4893561 |
Gene Length | 3462 bp |
Protein Length | 1153 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | |
Product | Serine/threonine protein kinase-like protein |
Protein accession | YP_003340003 |
Protein GI | 271965807 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.594701 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.339679 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTCTGCA GCCCCCTCAT CGAGGGCGAC CCCCAGCGCA TCGGCGGCTA CGCATTGGCG GGCAGGCTGG GCGTGGGTGG TCAGGGCGTG GTGTTCGAGG GTTACGGGCC CGATGGCGCC CGGGTGGCGA TCAAGGTGCT GCACGCCGAC ATGTCCGCGC TGCGGCCCCT GGACGGCGAG GTGGCAGCGC TGTTACGGGT GGCGCCCTTC TGCACGGCCC GGATCGTCGG CTTCGACCTC GACGCCGACC GGCCGTACAT CGTCAGCGAG TTCGTCCCCG GAGCCAGCCT GCGTGCGATC GTCCAACAGC ACGGGCCGTT GCGGGGTGAC GAGCTGCACC GGCTCGGGGT GGGGATCGCC ACCGCGATGG TGGCCATCCA CAGGGCCGGG GTCGTGCACC GCGACCTCAA GCCGGACAAC GTGTTGCTGA GCCCCGACGG TCCCCGCGTG ATCGACTTCG GCATCGCCAG GCTGCTCACC GGCGCGGCCA CGTCCGGCGT CGTCGGCACC CCGCTGTATA TGGCGCCCGA GGTCCTGCAC GGCGCACCCG CCGACCGGGC CGCCGACGTG TACGGCTGGG CGGCAGTGAT GCTGTTCGCC GCCTCTGCGC GGCCGCCCTA CCGGGCCCAG GCGTCAGCCG CCGGACTGCC CGAGCCGCTC CGCTCGCTCG TCCTGTCCGG GCTGGCGGCA CGCCCGGAAG CCCGGCCGGA GGCCCGCGAC GTGCTGCTGC GGCTGCTCGA ACACCGACCG GACCCGGCTC GCCTGATGGA GGCGGGCAGC AGGGCGGCGG GCACGGTCGG CCCACGCGGC AACGGCGTGG ATCCGCCGCT GGGCGAGCGC GCCGAGCAGG TGTTCGCCGC CCTCCCCGCG CCCGAGCGAG CCGCAGTGCC CGGCGTGTTG CTGCGCCTGA TGGGTCCGGG CGATCAGCTC AGGACCGCGC CGATGGCCGA GCTCGGTGAC AACGACCCGG CCGTCCGCGC CGTCGTCGAG GCGCTCTGCA TGGAGGGCAT CCTGCTGCGC TCTGGGACCG GCGTCTCCAT CGCCGCTCCC GCGCTGCCCG TGGCCTGGCC TCGGCTGGCC GACTGGCTGG CGGAGGAGCG TCCGGGACAG GCCGACCACC ACCGGCTGGG CGAGGCCGCA CGGATGTGGG CGGCGAACGG CCGCAAGGAC GCCGATCTCG ACCAGGGCTC TGCCCTCGAA CGCGACAACC GCTGGGCGGC AGAGGCCAGA AGGAACCTGC GGCTCAACGC CGTCGAACGG GACTTCCTGG CCGCCTCCGC CGCCCTGGCC GGCCGTCGGG TACGGCGCAG GCGGCTCCTG CTGGTCACGC TGGCCGTACT GCTGTCACTG ACGGCGGTCC TGGCCACGCT CGCCGAGACC CAGCGCCGGG TCGTCACCGC GCAACGCGAC GAGGCGATCG CCCGCAGCGT GGCGGCGCGG GTCCCCTCCT TACGCACGCT AGCGCCGTCG ACCGCGTTGC TTGCCGCCGT GGCCGCCTGG CGCGTCTCGC CGGTAGCGGA GGCGCGGCTG ACCCTGCTGT CGTCGCTCGG CCAGCCGGAC GTGCTGATAC AGGTGAAGGG TGCGTACGTC GCGGTCTCGG ATCAGGGCCA TGTGCTGTCG TGGAACAGCA ACTGGGCCGA GGTCTGGGAC ACCGGCTCAC GCGCGAAGGC CGGCACGATC CGCTCACCGG GCTGCTGCGC GAACGCCTTC CTCAGCCCCG ACGCCTCCAA GCTCCTGGCC ATCGACGCGT CCCAAACCAT CACCCGCGTC TTCGACGTGC GCAGCGGCAA GCGCCTCGGC GAGGCCGCGG CGCCGGGCAA CAGCGCAGTC TTCAGTGCCG GCGGCAGCAG GGCGGCGACT TTCACCCACC AATCCGACAG GCCCATCTCC GTATTCGACC TGACCCGCGG CACCGAGCTG GCCTCGCTGT CGAGGAAGGA CGTCTGGACG ATCGGCCTGA GCCCTGACGG TTCCACGCTG GCGATCGCCA CGGAAGGTGG CAGGGTGGAG CTGGTCGACG TCGTGTCGGG ACGCACGTCC CGGGAGTTCA CGGTCCCCAA GCCGGTCGAC GAGGAGACCT GGCTGCGCGA GCAGGCGAAC ATCGACATGC TGCGGTTCAC CGCGGATGGG ACCACCCTCG TGTCGAACAC AGGCGAGCTC AGGTTCTGGG ACGTCGCCTC CGGCTCTGAG CGGGCCGATC ACGCGGGCAA CGGCCTCGCC GCGCACGTGT TCGCCCTCGA CGCGAGCGGC CGGTGGATGG CGACGGCTGA CGGGCAGAGC ATCCAGCTCT GGAACCTCCC CAGCAACCGC TCCATGACCG TCATGTCCCC ACTGCCCGGG TTGATCGACG CGCTCGCCTT CACCGCGGAC GGGCGCGGCC TGTCACTCCT GCCGCGGGGG CTCGAGGCGC GGATGATCGA CCTCGCCCCG TACACGACTC CCCCGCGGTT GTACGGCATG GGCGAGGAGG CCACGAGCGC CGCCATTTTC CCACGAGCCG GTCGCGCGGC CACGGTGGCA CCGGATGGCG TACGTGTCTG GGACCTGCGC TCCCTCCGCC AGATCGGGCC CGCGACCGTG TTCACTTCCA TGCCGAAGAG CACCTCACCG TGCGGCGGCT CCGATGACGG CCCCTTCCAG GCGGTGAGTC TCAGCCCTGA CGGAAGCTTC CTAGCGGTAA TCACCCCAGG CGACGCCGTC CGCGTCAGCG AGGTCGCCAC GGGCCGTCTG GTGGTCAGAC TGCCCCTGCC GCAGGGGCAA CACGTCGCCT TCAGCCCCGA CGGCCGCACC CTCGTAGCCT CCGGCATCCG CCGCGCACCA CCCGAATGCG ACGAAGAGCT CATCATCCAG ACCTGGAACG CGGACTCCAG ATGGCGGCTT ACCTCCACGA CACCCGGGGC GCGAGGCCCG CTCGCCTTCA CCCCGGATAG CGCGAAACTG GTGGCCCTGG ACAACGACGG CATGGTGCTC ATCGACCCCG CAACCGGCAG GATCACCCGG CGCATCGACA CCAGCCGCCT CACGATCAGC CTGCTCGGCC TCGCCTCGGA CCCCCGCTAC GCCCTCCTCG ACTCCCGTGC CCTGTATCCC GTCGATCTGA CCACAGGACA ACTCCTCGAC TCCCCGCTGG CGGGAAAGCA CAGCGCGGAA TCCATCGCCT CGTCCGGAGA CGGGCGAACC CTGGCCATGG AGGACCGGAG CCACCGGATC CGGCTGCTCG ACACCGTCAC CGGCGACGTC ACAGACCTGC CCCTCCCGGG CGTGCCCGAC CCTGTGCGAG CCCTGGCCTT CTCCCTTGAC GGCCGAACCC TCCACGCCCT GACCAGCACC GGCATCGTCT ACACCCACGT CACCGACCCC GACAGCGCCG CAACCCTGCT CTGCACCCGC GCAGGAGGGC AACTGGCTCG GACGGAGTGG GAGAGATACA TCCCGCAACT GCCCTATCGT GACGTCTGCT AG
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Protein sequence | MVCSPLIEGD PQRIGGYALA GRLGVGGQGV VFEGYGPDGA RVAIKVLHAD MSALRPLDGE VAALLRVAPF CTARIVGFDL DADRPYIVSE FVPGASLRAI VQQHGPLRGD ELHRLGVGIA TAMVAIHRAG VVHRDLKPDN VLLSPDGPRV IDFGIARLLT GAATSGVVGT PLYMAPEVLH GAPADRAADV YGWAAVMLFA ASARPPYRAQ ASAAGLPEPL RSLVLSGLAA RPEARPEARD VLLRLLEHRP DPARLMEAGS RAAGTVGPRG NGVDPPLGER AEQVFAALPA PERAAVPGVL LRLMGPGDQL RTAPMAELGD NDPAVRAVVE ALCMEGILLR SGTGVSIAAP ALPVAWPRLA DWLAEERPGQ ADHHRLGEAA RMWAANGRKD ADLDQGSALE RDNRWAAEAR RNLRLNAVER DFLAASAALA GRRVRRRRLL LVTLAVLLSL TAVLATLAET QRRVVTAQRD EAIARSVAAR VPSLRTLAPS TALLAAVAAW RVSPVAEARL TLLSSLGQPD VLIQVKGAYV AVSDQGHVLS WNSNWAEVWD TGSRAKAGTI RSPGCCANAF LSPDASKLLA IDASQTITRV FDVRSGKRLG EAAAPGNSAV FSAGGSRAAT FTHQSDRPIS VFDLTRGTEL ASLSRKDVWT IGLSPDGSTL AIATEGGRVE LVDVVSGRTS REFTVPKPVD EETWLREQAN IDMLRFTADG TTLVSNTGEL RFWDVASGSE RADHAGNGLA AHVFALDASG RWMATADGQS IQLWNLPSNR SMTVMSPLPG LIDALAFTAD GRGLSLLPRG LEARMIDLAP YTTPPRLYGM GEEATSAAIF PRAGRAATVA PDGVRVWDLR SLRQIGPATV FTSMPKSTSP CGGSDDGPFQ AVSLSPDGSF LAVITPGDAV RVSEVATGRL VVRLPLPQGQ HVAFSPDGRT LVASGIRRAP PECDEELIIQ TWNADSRWRL TSTTPGARGP LAFTPDSAKL VALDNDGMVL IDPATGRITR RIDTSRLTIS LLGLASDPRY ALLDSRALYP VDLTTGQLLD SPLAGKHSAE SIASSGDGRT LAMEDRSHRI RLLDTVTGDV TDLPLPGVPD PVRALAFSLD GRTLHALTST GIVYTHVTDP DSAATLLCTR AGGQLARTEW ERYIPQLPYR DVC
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