Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_4377 |
Symbol | |
ID | 8667671 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | + |
Start bp | 4885976 |
End bp | 4886668 |
Gene Length | 693 bp |
Protein Length | 230 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_003340002 |
Protein GI | 271965806 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0177111 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACTAACC CCCCGGAGAT AGCCCGCGTG AAGAAGTTTC TGGCAAGCGC AGCCCTGACC TCAGCCTTCA TCGCCCTCCA TCCAGCGAGC GCGCTGGCCA CCCAAGCCCC TGCCAGTAGC GCCACCGCGC AAGCGTCCGC GTCGCCTACG CGGGCCAAGC TCACGATCAA GGGCGTCTTC CAGGCCACGG AGTATTGGTG CGCCCCGGCA TCGGCTTCGG TCGCTCTGCG CACGCTCGGT ATCAAGGTCA ACCAAGCCAC CTTGGCCAAG AAGATGCGAA CCAACAAGGA CGGCTCACTC GCCGATAACA TCCTGCGGGT GCTGAACGCA TACTCCAAGA AGACCGGGTA CACCTATGTG CCCTCATCGG ACGCGTACAG CTCCAAGCGT CTGGGCCAGC GGCTCGCCCA CAGCATCGGC ACCCTGGGCA AGGCCGTTCC GGTCCAGGTC TTCCTCGACC GGCTTCCCTG GTACAGGGAC GTCGACTTCG GCCGGAAGAA CGTCGGTCAC GTCATGATCG TTCACGGCTA TGACAAGGAG GCGAAGACCT TCATCGTCTG GGATCCCAAT AACTACACGG GTGACGGCGG CGAGCACCGC ATCACCTGGG CACAGCTCGC GAAGGCCTCC TTCTCGACCA ACCCCGCTCC CGGTTACAGC CGCTGGGGCA TCTACCAGCC CGTCAAGAAG TAG
|
Protein sequence | MTNPPEIARV KKFLASAALT SAFIALHPAS ALATQAPASS ATAQASASPT RAKLTIKGVF QATEYWCAPA SASVALRTLG IKVNQATLAK KMRTNKDGSL ADNILRVLNA YSKKTGYTYV PSSDAYSSKR LGQRLAHSIG TLGKAVPVQV FLDRLPWYRD VDFGRKNVGH VMIVHGYDKE AKTFIVWDPN NYTGDGGEHR ITWAQLAKAS FSTNPAPGYS RWGIYQPVKK
|
| |