| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_4368 |
|---|
| Symbol | |
|---|
| ID | 8667662 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | + |
|---|
| Start bp | 4875985 |
|---|
| End bp | 4877280 |
|---|
| Gene Length | 1296 bp |
|---|
| Protein Length | 431 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | |
|---|
| Product | major facilitator superfamily permease |
|---|
| Protein accession | YP_003339994 |
|---|
| Protein GI | 271965798 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGGGGGC GTGTCCGGTT TCTCGACACC CGCCCGCTGC GTAGCAGTCA GTCGTTTCGC
GACCTGTGGA TCGGCACCTC GGCCTCTCAA CTCGGCGGAC AGATAGCCAA CGTGGCGGTG
CTGGCCCAGG TCTGGGACCT GACCGGCAGC CCGGTGGGTA CCGGCGCCAT CGGGCTCGCC
ACCGGGCTGC CGATGGTGTT GTTCGGGCTG CTCGGCGGTA CGTTGGCCGA TACTGTTGAC
CGTCGTGCGG TGGTGCGGGC CAGCACCGTA GGCCAACTGC TGGCCGCCGT AGGGCTGTGC
GCGCAGGCTC TGGCGGGCAA CCGAAACGTA GTGCTGCTGC TCGCGCTGGT CGCCATGGGG
ACGACCTGCA GCGCTCTCGG AGCTCCTGCC CGGCGCGCCT TCCCGGTCCG GCTGTTGCCG
GGCGACCAGG TCGCGGCCGG TCTCGCGCTG ACCAATGTCT CCTTCCAGGC GGCGATGCTG
GCCGGTCCCG CGCTGGCCGG ACTGATCATC GCCCGCTGGG ATTTCCCTGC CGCATACGCG
ACCCAGGCCG TGGCCGTAGC AGTCTCGATG CTCGCGGCGG TCCGCCTACC TGCCATGCGG
CCCGAAGGCA CCGGCGCGGC AGGCGGCAGG CGCCGGCCAA AGCGCGGCGG CTGGCGGATC
GTCCTGCGCC GTCCGACGCT GTGGGGCTCG ATGGCCACCG ACCTGTCCGC GACGCTGCTC
GCCATGCCGA TCGCGCTCTT CCCGCTGGTC AACGAGATCC GTTTCGAGGG CAACCCGCAG
ACCCTCGGTC TGTTCCTCTC GGCCGTCGCG GTCGGGGGGA TCACGGCCGG TCTGCTCTCC
GGCACGGTGA CGCGCTGGCG CCGTGCCGGC CTGGTACAGC TGTCCGCAGC CGGTGTATGG
GGTCTGGCGC TGGCCTGTTT CGGTCTGGCT GGGTCGTTGT GGCTGGCGCT CGGCTGCCTG
GCCGTGGCAG GCGCTGCCGA CACCGTGTCG GTAGTCACCC GCAGTGCCCT GGTGCAATTG
GAGACCCCGG ACGCCTACCG GGGGCGGGTC TCCTCCGTGG AACACGTCAT CGGCGTCGCG
GGCCCCGAAC TCGGCAACTT CCGCGGTGGC CTCTTGGCGT CGGCCACCTC CGCCTCCTTC
TCCCTGGTCG TCGGCGGGCT GTCCGCCATC CTGGCGATCG CCGCCGTGGC CGCGACCAAT
GCCCCCCTTC GCGCCTACCG CACGCCTCCT GCTGCCGTGA AGCCGACCGC CCCTGGGGTC
GCCGACGCGG CGGCGGCCGC TGGTCAGGTT TGCTGA
|
|---|
| Protein sequence | MRGRVRFLDT RPLRSSQSFR DLWIGTSASQ LGGQIANVAV LAQVWDLTGS PVGTGAIGLA
TGLPMVLFGL LGGTLADTVD RRAVVRASTV GQLLAAVGLC AQALAGNRNV VLLLALVAMG
TTCSALGAPA RRAFPVRLLP GDQVAAGLAL TNVSFQAAML AGPALAGLII ARWDFPAAYA
TQAVAVAVSM LAAVRLPAMR PEGTGAAGGR RRPKRGGWRI VLRRPTLWGS MATDLSATLL
AMPIALFPLV NEIRFEGNPQ TLGLFLSAVA VGGITAGLLS GTVTRWRRAG LVQLSAAGVW
GLALACFGLA GSLWLALGCL AVAGAADTVS VVTRSALVQL ETPDAYRGRV SSVEHVIGVA
GPELGNFRGG LLASATSASF SLVVGGLSAI LAIAAVAATN APLRAYRTPP AAVKPTAPGV
ADAAAAAGQV C
|
|---|
| |