Gene Sros_4316 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_4316 
Symbol 
ID8667610 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp4824247 
End bp4825251 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content69% 
IMG OID 
ProductGlyceraldehyde-3-phosphate dehydrogenase (phosphorylating) 
Protein accessionYP_003339946 
Protein GI271965750 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.520757 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGTTC GTATCGGCAT CAACGGCTTC GGGCGGATCG GTCGCAACGT CTTCCGCGCG 
GTAGCCGCCC GGGACGCGGA CCTGGAGATC GTCGCGCTCA ACGACCTCGG TGATGTGGCG
ACCATGGCCC ACCTGCTGGC CTACGACTCG ATCCTGGGCC GCTTCCCCGG CGAGATCACC
GCCGAGCCCG GTGCGATCCG TATCGGGGAC AAGACCGTCA AGGTCCTGGC CGAACGCGAC
CCCGCCGACC TGCCGTGGGG GGACCTGGGA GTGGACGTGG TCATCGAGTC CACCGGAATC
TTCACCCATG CCGCCAAAGC CCGCGCGCAC GTCGACGGCG GCGCGAAGAA GGTCATCATC
GCCGCCCCGG CCAGTGGCGA AGACGTCACG ATCGTGCTCG GCGTCAACCA GGACGCCTAC
GACCCGGAGC GCCACACGAT CATCTCCAAC GCCTCGTGCA CCACCAACTG CCTCGGAGTG
CTGGCCAAGG TGCTGCACGA CGCCGTCGGC ATCGACTCCG GCATGATGAC CACCGTCCAC
GCCTACACCC AGGACCAGAA CCTCCAGGAC GCCCCGCACG GGGACCTGCG ACGCGCTCGC
GCCGCGGCCC TCAACATCGT GCCCACCTCC AGCGGAGCCG CCAAGGCCAT CGGCCTGGTC
CTGCCCGAAC TCCAGGGCCG TCTCGACGCC TTCGCCCTGC GGGTTCCCGT CCCCACCGGC
TCGGTCACCG ACCTGACCGT CACCACCAGC CGCCGCACCA CCTTGCAAGA GGTCAAGGAC
GCCTACGCCC AGGCCGCCGC CGGTCCGTAC AAGGGCCTGC TGTCCTACAC CGAGGCGCCC
ATCGTCAGCA CCGACATCGT CAGCGACCCC GCCTCCTGTG TCTTCGACGC CGAACTCACC
CGCGTCCTCG GCCCGCAGGT CAAGGTCGTC GGCTGGTACG ACAACGAGTG GGGCTATTCC
AACCGCCTCA TCGACCTGGC CCTCCTGGTC GGCAGCACCC TGTAG
 
Protein sequence
MTVRIGINGF GRIGRNVFRA VAARDADLEI VALNDLGDVA TMAHLLAYDS ILGRFPGEIT 
AEPGAIRIGD KTVKVLAERD PADLPWGDLG VDVVIESTGI FTHAAKARAH VDGGAKKVII
AAPASGEDVT IVLGVNQDAY DPERHTIISN ASCTTNCLGV LAKVLHDAVG IDSGMMTTVH
AYTQDQNLQD APHGDLRRAR AAALNIVPTS SGAAKAIGLV LPELQGRLDA FALRVPVPTG
SVTDLTVTTS RRTTLQEVKD AYAQAAAGPY KGLLSYTEAP IVSTDIVSDP ASCVFDAELT
RVLGPQVKVV GWYDNEWGYS NRLIDLALLV GSTL