Gene Sros_4290 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_4290 
Symbol 
ID8667584 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp4790086 
End bp4790964 
Gene Length879 bp 
Protein Length292 aa 
Translation table11 
GC content67% 
IMG OID 
Productbile acid:sodium symporter 
Protein accessionYP_003339923 
Protein GI271965727 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCCTTG CCGGAACCCT CCTGCCCATC GCACTGGCGA TCATCATGTT CGGCCTCGGG 
CTGAGCCTGA CGATCTCCGA CTTCCGCCGC GTCGTCGTCT ATCCGAAAGC CACCGTCGTG
GCGCTCGGCT GCCAGATCCT GCTGCTGCCG GCGATCTGCT TCGGCCTGGT GATCGCCTTC
GACCTGCCGG CCGCCCTCGC CGTCGGCATG ATGCTGCTGG CCGCCTCGCC CGGCGGCACG
ACCGCCAACC TCTACAGCCA CCTGTTCGGC GGTGACGTCG CGCTCAACGT GACGCTGACC
GCGATCAACT CGGTGCTGGC CGTGGTGACG TTGCCACTGG TGACCAACCT GTCGCTGTCC
TACTTCGACG GCGGCTCGGG CACGCTCGGC CTGCAGTTCG ACAAGACCCT GCAGGTGATG
GCGATCGTGC TGGTGCCGGT CGCCGCCGGC ATGGCGGTCC GTGCCATGGC GCCGCGGTTC
GCCGAACGGA TGAACACGCC CGTGAAGATC GCGTCGGCGG TCATCCTGGC GCTGGTGATC
GCCGGCGCGC TGCTCCAGGA ACTCGACAAC CTCGGCGGCT ACATCCAGTC GGTGGGCCTG
ATCACGCTGG CGTTCAGCGT GATCAGCCTG ACCATCGGTT ACTGGGCGCC GCGCCTGGCC
GGGGTACGGC GCGACCAGGC CGTCGCCTCC TGCATGGAGA TCGGGATCCA CAACGGCGCG
CTGTCGATCG CGGTGGCGCT CTCCCTGCTG AACAGCACCC AGATGGCCAT CCCGGCCGCC
ACCTACGGCG TGCTGATGTT CTTCACCGCG GCAGGAGCCG GGTTCCTGCT CAGATCTCGT
ACGGCAGAGC CGATCCTTTC CGAAGGGAGT TCAGTGTGA
 
Protein sequence
MALAGTLLPI ALAIIMFGLG LSLTISDFRR VVVYPKATVV ALGCQILLLP AICFGLVIAF 
DLPAALAVGM MLLAASPGGT TANLYSHLFG GDVALNVTLT AINSVLAVVT LPLVTNLSLS
YFDGGSGTLG LQFDKTLQVM AIVLVPVAAG MAVRAMAPRF AERMNTPVKI ASAVILALVI
AGALLQELDN LGGYIQSVGL ITLAFSVISL TIGYWAPRLA GVRRDQAVAS CMEIGIHNGA
LSIAVALSLL NSTQMAIPAA TYGVLMFFTA AGAGFLLRSR TAEPILSEGS SV