| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_4259 |
|---|
| Symbol | |
|---|
| ID | 8667553 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | - |
|---|
| Start bp | 4743023 |
|---|
| End bp | 4744360 |
|---|
| Gene Length | 1338 bp |
|---|
| Protein Length | 445 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | |
|---|
| Product | putative transmembrane efflux protein |
|---|
| Protein accession | YP_003339901 |
|---|
| Protein GI | 271965705 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.796571 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.885395 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACTACCC CACTGGCCGT CTCGCCCGCA CCCACGCGGC CGACCGCCCC CGCCTTCGCT
CTGCTCGGCA CCGTCCAGAT CGTGCTGATC TCGGGCATAA CCGTCGTCTC CGTCGCCCTG
CCTGCGATCC AGGACGAGTT GCGGCTCAGC GGTGGCGACC TGGCGCTGGT CAGTACGGCG
TACGGGCTGG CGTTCAGCGG GTTACTGCTG CTCGGCGGCA GGCTGGCGGA CCTGTATGGC
AGGCGCCAGG TGTTCATGCT GGGCCTCGGT CTGTTCGGGG TTTCCTCGGC TGCGGCCGCC
CTGGCCCCCG GGCTCGCCCT GCTGCTCACC GCGCGGTTCG CTCAGGGCAT CGGTGCCGCC
CTGGCGGCTC CCTCGGCCAT GGCCCTGCTC GGCGTGCTTT TCCCCGACCC CCACAGGCGG
GCCCGGGCCA CCGCCGTCTG GGGTGGTCTG GCGGGCATCG GTGCGACCGG GGGCATGCTG
CTGTCCGGCG TGTTCGCCGA GTGGGCGTCA TGGCGGTGGG CATTCGGCGT GCCGGTGATC
GCCGCGGCCC TCGCCATCGT GGCGGCACCC CGGCTACTCC CCGCCGATCG GCCGGTACGG
CGTGCTCGCA TCGACATCCT CGGCGCCGCA CTGGTGACGG CAGGGCTCTC GACACTGAGC
TACGGGCTGG TGGAGAGCTC GTACGGCCCG CTCATCGGCG GAGTCGTTCT GCTGCTCACC
TTCATGGTCG TGGAATCCCG TACGGCTGCC CCTCTGGTGC CGCCGGCGTT CTTCGCCGCA
CCGCGAAGAG CCGTCGCGCT GGCGGCGATC GTACTTGGCT CAGCGGGCAT GGCCACCAGT
CTCTTCTTCC TCTCGCTCCA TCTCCAGCAG GTTCGTGGCC TATCTCCGCT GCTGACCTCT
GCCGCGTTCC TGCCGTACGG CGCGGTCCTG ATCGGTACGG GCGCGGTCGC CGGGCGGCTA
CTGGGGCGCT TCGGCATCCG GATCGTTCTC ACGACCGGCC TGATCATGGC CGCCGCCGGA
CTGGCCCTGG TCAGCAGGTT CGACGGCGCC CTCGTCGCCG GACTGCTGGT CCTGCCGTTC
GGCATCGGCC TGACGTTCGC CGGCGCGACC GTGGCCGCGG TCGCCGATGT GCCCGACGAG
CAGGCCGGGC TCGCCGGTGG CGTGGTCAAC ACCGCGATGG AGATCGGACC GACCCTCGGT
CTCGCCGTAC TGGTGTCACT GGCCGCGGTA CAAGCCGGTG ACACAACCTC CGGCTACGGC
TTCGCGCTCG GCATCGCCGC TGTCGCCTTC ATCCTCATCG CCCCGATCGC AGCCCTGCTA
CTGCGCACCC CTCAATAA
|
|---|
| Protein sequence | MTTPLAVSPA PTRPTAPAFA LLGTVQIVLI SGITVVSVAL PAIQDELRLS GGDLALVSTA
YGLAFSGLLL LGGRLADLYG RRQVFMLGLG LFGVSSAAAA LAPGLALLLT ARFAQGIGAA
LAAPSAMALL GVLFPDPHRR ARATAVWGGL AGIGATGGML LSGVFAEWAS WRWAFGVPVI
AAALAIVAAP RLLPADRPVR RARIDILGAA LVTAGLSTLS YGLVESSYGP LIGGVVLLLT
FMVVESRTAA PLVPPAFFAA PRRAVALAAI VLGSAGMATS LFFLSLHLQQ VRGLSPLLTS
AAFLPYGAVL IGTGAVAGRL LGRFGIRIVL TTGLIMAAAG LALVSRFDGA LVAGLLVLPF
GIGLTFAGAT VAAVADVPDE QAGLAGGVVN TAMEIGPTLG LAVLVSLAAV QAGDTTSGYG
FALGIAAVAF ILIAPIAALL LRTPQ
|
|---|
| |