Gene Sros_4249 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_4249 
Symbol 
ID8667543 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp4733266 
End bp4734474 
Gene Length1209 bp 
Protein Length402 aa 
Translation table11 
GC content67% 
IMG OID 
Productphage tail sheath protein FI 
Protein accessionYP_003339894 
Protein GI271965698 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.408866 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.264788 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAAGTT ACCTTCGCCC CGGGATCTAC CTCGAGGAGG TGGCGTATTC GCAGGGGCCG 
AAGCCCCCGC TCCGGCAGCG GCCTCCAGAG GTCGAAGACG ACCTCGGGGG CCGGCCCAGG
CCTCGCTGGC TACCGGAGCA TACGCACGCG GCCTTTGTCG GTTTCGCCGC GGCGGGACCT
TTTCACCTGC CCACCTGGCT GCACAGCTGG GCACAGTTCC AGCAGAACTT CGGGGACTTC
GCCGAGGGCT TCGCGCTGGC GCACGCGGTC TACGGATTCT TCGCCAACGG CGGGCAGGCC
TGCGTGGTGG TGCGGGTCGG GCACGACTCC GAAGACCTGC GTGACACGTT CGTCGGAGAC
GTCGATCACC GTACCGGTGT CGCCGCCCTG CAGCCCCTGG AGGATGTCTC GATCATCTGC
GCGCCGGATC TGATGACCTC CTACGGACGC CGTCGCATGG ATCTCGACGC CGTCAGGGCC
GCCCAGGTCG CGCTGATAGC CCATTGCGAG TTCAGCGGCG ACCGCATGGT CATCCTGGAC
TGTCCCCCCG GCCTCTCCCC ACAGCAGGCC AGAGACTGGC GGATGGAGCT GACGGCCTAC
GACAGCGCCC AGGCGGCGCT GTACTACCCG TGGATCAAGG TGTACGACCC GTTCACCGGC
ATGAGTCGTT CCGTGCCGCC GTGCGGGCAC GTCGCCGGCG TCTACGCCAG GGTGGACCTC
CTGCGCGGTT TCCATCACAC GCCGGCCAAC CAGTCGCTGG AGAGCGCCCG TTCGGTCGAG
CTGGTCGTCT CCCACAGCGA GCAGGAGGTG CTGAACCCGA TCGGCGTCAA CACCCTGGTC
ATGTCGCCCG GCCGTGGAGT CGTGGTCTGG GGCAGTCGCA CGCTGAGCAG CAATCCCGAC
TGGCGCTACA TCCACCGTCG CCGGGTGGTC AACTTCATCC TCCGCAACAT TCGCAGGGGA
ACCGAGTGGG CGATCTTCGA ACGACCGGAC GACCTCAGCC TGCGTCCGCG CATCGCCGCG
GACATCAGGG ACTTCCTGCA CCTGCTGTGG CGCAGCGGGG CACTGTGGGG GGACACCCCT
GAAGACGCCT TCTGGGTGAG CTACGACAGC GGCCCGTTCG GCGACGACAG AAGCGTGTAC
ATCGACTGCA CCATCGAGCT GGAGGATGGT TTCACGTCCA GTTTCCGCCT GCTGTACTTC
TGCGACTAG
 
Protein sequence
MPSYLRPGIY LEEVAYSQGP KPPLRQRPPE VEDDLGGRPR PRWLPEHTHA AFVGFAAAGP 
FHLPTWLHSW AQFQQNFGDF AEGFALAHAV YGFFANGGQA CVVVRVGHDS EDLRDTFVGD
VDHRTGVAAL QPLEDVSIIC APDLMTSYGR RRMDLDAVRA AQVALIAHCE FSGDRMVILD
CPPGLSPQQA RDWRMELTAY DSAQAALYYP WIKVYDPFTG MSRSVPPCGH VAGVYARVDL
LRGFHHTPAN QSLESARSVE LVVSHSEQEV LNPIGVNTLV MSPGRGVVVW GSRTLSSNPD
WRYIHRRRVV NFILRNIRRG TEWAIFERPD DLSLRPRIAA DIRDFLHLLW RSGALWGDTP
EDAFWVSYDS GPFGDDRSVY IDCTIELEDG FTSSFRLLYF CD