| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_4246 |
|---|
| Symbol | |
|---|
| ID | 8667540 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | - |
|---|
| Start bp | 4729638 |
|---|
| End bp | 4731281 |
|---|
| Gene Length | 1644 bp |
|---|
| Protein Length | 547 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | |
|---|
| Product | Cholesterol oxidase |
|---|
| Protein accession | YP_003339891 |
|---|
| Protein GI | 271965695 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.191663 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGACA ACACCTCGGG CAGCACCGAC TCCAAAGGGA TCTCACGTCG TGGATTCATC
GCTGGAACCG GTTCCATCTT GGGGGTCGCG GCCCTTACGG GTCGCGCCAC CGCAGCCCAG
GCGGCGGCCC TCCCCGCGGC CGCTCCGATC AGCAGTGGGG CACACGTCCC GGCCCTGGTG
ATCGGCACCG GATACGGCGG CTCCGTCGCC GCCCTGCGTC TCGCCCAGGC GGGCGTCGAC
GTGCACATGA TCGAGATGGG CATGGCCTGG GACACTCCCG GCTCCGACGG CAAGATCTTC
TGCAACACGC GCGAGCCGGA CTACCGGTCC TACTGGCTGC GCACCAAGAG CAAGGCGCCC
CTCAACTACT TCCTCGGCTT CCCGATCGAC AGGAACATCC CCCGCTACAC CGGGATCCTG
GACGCCGAGG ACTTCAGCGG CATCACGGTC TACCAGGGCC GCGGCGTCGG CGGCGGCTCG
CTGGTCAACG GCGGCATGGC GGTCACCCCC AAGCGCGAGA ACTTCGGCGC CGTCCTCCCG
TCGGTGAACG CCGCCGAGAT GTACGACATC TACTATCCGC GCGCCAACGC CGGGCTCGGG
GTCAGCTCCA TCGATCCGGC CTGGTTCGAT TCCACCGCCT GCTACCAGTA CGCCCGGGTC
GGCCGCAAGC ACGCCCAGCG TTCCGGCTTC CCGTTCGTCT TCGTGCCCGA CGTCTACGAC
TGGGACTACA TGAAGCAGGA GGCGGCCGGG ACCGTCACCA AGTCGGCGCT GGCCGGAGAG
ATCCTCTACG GCAACAACCA CGGCAAGAAA TCGCTGCAGC AGACCTACAT CGCCCGGGCC
AAGGCCACCG GCAGGGTCGC CATCTCGCCG CTGCACAAGG TCACCTCGGT CGCTCCGGCG
GCCGGCGGCG GCTACACGGT CGTCATCGAC CAGATCAACA CCAACGGCGA CACCACGGCC
ACCAAGACCG TGACCGCGGA CAGGGTGTTC TTCGCCGCCG GCAGCGTCGG CACCAGCAAA
CTGCTGGTCA AGCTGAAGGC CACCGGCGCA CTGCCCAACC TCAACGACGA AATCGGCAAG
GGCTGGGGCG ACAACGGCAA CGTCATGTGC GGCCGCGCCA ACCACATGTG GGACCCGACC
GGCAGTCTCC AGTCGGCCAT CCCCTGCGCC GGCATCGACA ACTGGGCCGC CGGCGGCGCG
TTCGCCGAGG TCGCGCCACT GCCCACCGGG ATCGAGACCT ACGCCTCGTT CTACCTGTCG
ATCACCAAGA ACCCGAACCG CGCCCAGTTC TCCTGGAACG CCGCGACCGG CAAGGTCGAC
CTGAACTGGC AGACCTCCTG GAAGCAGCCG TCCATCGACA TGGCCAAGAC GATCTTCGAC
AAGATCAACT CGAAGGAGGG GACGATCTAC CGGACCGACC TCTTCGGCAC CTACAAGATC
TGGGGCGATC ACCTCACCTA CCACCCGCTC GGCGGCGCGG TCCTGAACAA GGCCACCGAC
AACTACGGCC GTCTCGCCGG CCATCCCGGC CTGTATGTCA TCGACGGCTC GCTGATCCCC
GGCAACACCA GCGTCAACCC GTTCGTCACC ATCACGGCGC TCGCCGAACG GAACATCGAA
AAGATCATAG CCACCGATCT GTGA
|
|---|
| Protein sequence | MSDNTSGSTD SKGISRRGFI AGTGSILGVA ALTGRATAAQ AAALPAAAPI SSGAHVPALV
IGTGYGGSVA ALRLAQAGVD VHMIEMGMAW DTPGSDGKIF CNTREPDYRS YWLRTKSKAP
LNYFLGFPID RNIPRYTGIL DAEDFSGITV YQGRGVGGGS LVNGGMAVTP KRENFGAVLP
SVNAAEMYDI YYPRANAGLG VSSIDPAWFD STACYQYARV GRKHAQRSGF PFVFVPDVYD
WDYMKQEAAG TVTKSALAGE ILYGNNHGKK SLQQTYIARA KATGRVAISP LHKVTSVAPA
AGGGYTVVID QINTNGDTTA TKTVTADRVF FAAGSVGTSK LLVKLKATGA LPNLNDEIGK
GWGDNGNVMC GRANHMWDPT GSLQSAIPCA GIDNWAAGGA FAEVAPLPTG IETYASFYLS
ITKNPNRAQF SWNAATGKVD LNWQTSWKQP SIDMAKTIFD KINSKEGTIY RTDLFGTYKI
WGDHLTYHPL GGAVLNKATD NYGRLAGHPG LYVIDGSLIP GNTSVNPFVT ITALAERNIE
KIIATDL
|
|---|
| |