Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_4230 |
Symbol | |
ID | 8667524 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | - |
Start bp | 4714221 |
End bp | 4715246 |
Gene Length | 1026 bp |
Protein Length | 341 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | |
Product | periplasmic binding protein |
Protein accession | YP_003339875 |
Protein GI | 271965679 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.973317 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.0372991 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCCCCC CTCTCAAGAC GAACCGCCTG CTGACGGCAT TCGCCGCTTT GACGTTGGCC GTGACCGCCT CAGCCTGCGG CGGCGACGGC CCGTCCAGCC CCCGGGCTGA GGCCACGACC GTGGGGGCGC CCACCGCCGG AACCGCTTTC CCGCTCAAGG TCGAGCACCT CCACGGCACC ACGGAGATCA CCAGGAAGCC GGAGCGGATC GTCACCATAG GCCTCAGCGA CCACGAGCCC CTGCTGGCCC TCGGGCACAG GCCGGTGGGC GTGGTGGACT GGTTCCAGCG CACGCCGTTC ACCGACTGGC CGTGGGCCAA GGAAGCGTGG GGCGGCGTCG AGCCCACCGT GCTCGGCCTG CGCGAGGACG GCGTCAAAAT GGAGAAGGTC GTCGCGCTCA AGCCCGACCT GATCTTCGCC ATGTACTCCG GGATTCAGAA GGAGCAGTAC GACCAGCTCT CGAAGATCGC CCCCGTCGTG GCCCAGCCCA AGGGCTTCGA CCCCTACGCC GCGCCGTGGC AGGAGATGAC GCTGCTCGCC GGACGGGCCC TCGGCGAAGA GGCCGAGGCC AAAACGCTCA TCGACCGCAT CGGCGTGAAG TTCACCGAGG TCCGCGAGGC CAACCCGCAG TGGAAGGGCC TGACGGCCGT CGCCGCCGAC AGCTTCAAGG CCGGGACGTA CTCGGCCTTC CAGAAGGGCG ATCCCAAGTC GGCCTTCCTC GCCGAGCTCG GCTTCACGAT CCCCGAGAGG ATCACCAAGC AGGCGGGCCG GTCCAATGTC GCCGAGTTCG GCTCGGAGGG GTTGAACATG CTGGAGGTCG ACCGGCTGGT CTGGCTGACG ACCGGCAAGG AGCCCTGGGC GCGCATCAAG AACGACAGCG TGTACAAGGA ACTCAAGGTC GCCAAGGAGG GCCGCGACCT CTTCCTGACC TACCAGGACC CGCCGATCGG CGCGGCACTG TCCTTCAACA CCGTGCTGAG CATCCCCTAC GCGATCGACC AGGTCCCTCC GTTGATCAAG AAGTGA
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Protein sequence | MLPPLKTNRL LTAFAALTLA VTASACGGDG PSSPRAEATT VGAPTAGTAF PLKVEHLHGT TEITRKPERI VTIGLSDHEP LLALGHRPVG VVDWFQRTPF TDWPWAKEAW GGVEPTVLGL REDGVKMEKV VALKPDLIFA MYSGIQKEQY DQLSKIAPVV AQPKGFDPYA APWQEMTLLA GRALGEEAEA KTLIDRIGVK FTEVREANPQ WKGLTAVAAD SFKAGTYSAF QKGDPKSAFL AELGFTIPER ITKQAGRSNV AEFGSEGLNM LEVDRLVWLT TGKEPWARIK NDSVYKELKV AKEGRDLFLT YQDPPIGAAL SFNTVLSIPY AIDQVPPLIK K
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