Gene Sros_4230 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_4230 
Symbol 
ID8667524 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp4714221 
End bp4715246 
Gene Length1026 bp 
Protein Length341 aa 
Translation table11 
GC content68% 
IMG OID 
Productperiplasmic binding protein 
Protein accessionYP_003339875 
Protein GI271965679 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.973317 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.0372991 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCCCCC CTCTCAAGAC GAACCGCCTG CTGACGGCAT TCGCCGCTTT GACGTTGGCC 
GTGACCGCCT CAGCCTGCGG CGGCGACGGC CCGTCCAGCC CCCGGGCTGA GGCCACGACC
GTGGGGGCGC CCACCGCCGG AACCGCTTTC CCGCTCAAGG TCGAGCACCT CCACGGCACC
ACGGAGATCA CCAGGAAGCC GGAGCGGATC GTCACCATAG GCCTCAGCGA CCACGAGCCC
CTGCTGGCCC TCGGGCACAG GCCGGTGGGC GTGGTGGACT GGTTCCAGCG CACGCCGTTC
ACCGACTGGC CGTGGGCCAA GGAAGCGTGG GGCGGCGTCG AGCCCACCGT GCTCGGCCTG
CGCGAGGACG GCGTCAAAAT GGAGAAGGTC GTCGCGCTCA AGCCCGACCT GATCTTCGCC
ATGTACTCCG GGATTCAGAA GGAGCAGTAC GACCAGCTCT CGAAGATCGC CCCCGTCGTG
GCCCAGCCCA AGGGCTTCGA CCCCTACGCC GCGCCGTGGC AGGAGATGAC GCTGCTCGCC
GGACGGGCCC TCGGCGAAGA GGCCGAGGCC AAAACGCTCA TCGACCGCAT CGGCGTGAAG
TTCACCGAGG TCCGCGAGGC CAACCCGCAG TGGAAGGGCC TGACGGCCGT CGCCGCCGAC
AGCTTCAAGG CCGGGACGTA CTCGGCCTTC CAGAAGGGCG ATCCCAAGTC GGCCTTCCTC
GCCGAGCTCG GCTTCACGAT CCCCGAGAGG ATCACCAAGC AGGCGGGCCG GTCCAATGTC
GCCGAGTTCG GCTCGGAGGG GTTGAACATG CTGGAGGTCG ACCGGCTGGT CTGGCTGACG
ACCGGCAAGG AGCCCTGGGC GCGCATCAAG AACGACAGCG TGTACAAGGA ACTCAAGGTC
GCCAAGGAGG GCCGCGACCT CTTCCTGACC TACCAGGACC CGCCGATCGG CGCGGCACTG
TCCTTCAACA CCGTGCTGAG CATCCCCTAC GCGATCGACC AGGTCCCTCC GTTGATCAAG
AAGTGA
 
Protein sequence
MLPPLKTNRL LTAFAALTLA VTASACGGDG PSSPRAEATT VGAPTAGTAF PLKVEHLHGT 
TEITRKPERI VTIGLSDHEP LLALGHRPVG VVDWFQRTPF TDWPWAKEAW GGVEPTVLGL
REDGVKMEKV VALKPDLIFA MYSGIQKEQY DQLSKIAPVV AQPKGFDPYA APWQEMTLLA
GRALGEEAEA KTLIDRIGVK FTEVREANPQ WKGLTAVAAD SFKAGTYSAF QKGDPKSAFL
AELGFTIPER ITKQAGRSNV AEFGSEGLNM LEVDRLVWLT TGKEPWARIK NDSVYKELKV
AKEGRDLFLT YQDPPIGAAL SFNTVLSIPY AIDQVPPLIK K