Gene Sros_4229 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_4229 
Symbol 
ID8667523 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp4713006 
End bp4713911 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content74% 
IMG OID 
Productputative LysR family transcriptional regulator 
Protein accessionYP_003339874 
Protein GI271965678 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.552994 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0655244 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACTGA GGCAGCTGGA ATACTTCGTC GCGGTTGCCG AGGAGCGGAA CTTCACCCGG 
GCGGCCGAGC GGGTGCACAT CAGCCAGTCC GGCGTCAGCG CCCAGATCCG CCAGCTGGAA
CGCGAACTCG GCGCCGAGCT GTTCGACCGG TCGGCGCGCA CCGCCACCCT CACCGTCGCG
GGAAAGGCCG CGCTCGAACA CGCCCGCGCC GCGCTCGCCG CCGCCGGCGC GCTCGGCCAG
GCGGTGGGCG AGGTGACCGA CCTGATCCGG GGCCGGCTCA CGGTCGGGAT GGTCATCGGC
TGCACCGTCA CGCCGCTGTT CGACGCCCTC GCCGCCTTCC ACCGGGCGCA TCCCGGCGTG
GAGATCTCGC TGCTGGAGGA CAACTCCGAC CGGCTCGTCG AGGGCGTGCG CGCCGGCACC
CTCGACCTGG CGCTCGCCGG GACCGCGACC GCCACCCCCG ACGGGCTGGA CGCACTGACG
ATCATCAGCG AGCGGCTCGT CGCGGCGGTC CCGGCCGGGC ACCCCCTGGC GGAGCAGCGG
CGGATCACCC TGCGCGAGCT GAGCGCCCAC CCGATCGTGT GCATGCCCCC CGGCACCGGC
CTGCGCACGG TGTTCGACCA GGCCTGCGCG GCACAGGGCA TCCAGCCGGT GATCGCGCTG
CAGGCCAGCG CCGCGGACGC CATCGCCGAC CTCGCCGCCC GCGGGCTCGC CGTCGCCGTC
CTCAGCGACT CGATGGCCGC GCACTACCGT GACCGGCTCA CCGCCCTCAT CATCGACGAC
GTCGAGACAC CCGCCCTGCT CGCCCTGGTC TGGAAGGACA CCCACAGTCC CGCGATACGC
GAGTTGCTCG TGCACAGCCG CCGGGCATTC GCCGGGCCCG CCCCTGACGG GAAACGCCCC
CGCTGA
 
Protein sequence
MELRQLEYFV AVAEERNFTR AAERVHISQS GVSAQIRQLE RELGAELFDR SARTATLTVA 
GKAALEHARA ALAAAGALGQ AVGEVTDLIR GRLTVGMVIG CTVTPLFDAL AAFHRAHPGV
EISLLEDNSD RLVEGVRAGT LDLALAGTAT ATPDGLDALT IISERLVAAV PAGHPLAEQR
RITLRELSAH PIVCMPPGTG LRTVFDQACA AQGIQPVIAL QASAADAIAD LAARGLAVAV
LSDSMAAHYR DRLTALIIDD VETPALLALV WKDTHSPAIR ELLVHSRRAF AGPAPDGKRP
R