| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_4226 |
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| Symbol | |
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| ID | 8667520 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Streptosporangium roseum DSM 43021 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013595 |
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| Strand | + |
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| Start bp | 4707978 |
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| End bp | 4710020 |
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| Gene Length | 2043 bp |
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| Protein Length | 680 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | |
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| Product | RNA polymerase sigma factor containing a TPR repeat domain-like protein |
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| Protein accession | YP_003339871 |
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| Protein GI | 271965675 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.338891 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0144943 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACACCCC GCGGGAGCGC CGCCCCCGGT TTGCGCACGA GCCGGGGCGG TGCTCTTATC
GTGCCCATGA CGGCCCGGAA CGTCCATGGT GCGATCGACG CGGTCTGGAA GTTCGAGTCC
GCGAGGATCA TCGCCGGGCT CACCAGAATG GTCCGCGACG TCGGCCTCGC CGAGGAGCTC
GCGCAGGACG CGCTGGTAGC CGCGCTCGAA CAGTGGCCCG GACAGGGCGT CCCGGATAAT
CCGGGCGCAT GGCTCATGAC CACCGCCAAA CGCCGGGCCA TCGATCACCT CCGCCGCGGC
GAGCGGCTGG AACGCAAGCA CGAAGAGATC GCCCACGCGC TGGAACAGCA GGGTCTCGAA
GAAGGTGTGG ACGACGACGT CCTGCGGCTG ATGTTCGTCT CCTGCCACCC GGTGCTGCCG
GCCGAGGCAC GGGCCGCGCT GACGCTCCGG CTGCTCGGCG GTCTGACCGC CCTGGAGATC
GCCCGGGCCT TCCTCGTGTC CGAGCAGGCC GTCGCCCAGC GCATCGCGAA GGCCAAGCGC
ACCCTCGCCG AAGAGCGGGT CCCGTTCGAA CTGCCTCCCG GACCGGAACT CGCCGGACGG
CTGGCGTCCG TGCTCGAAGT CATTTACCTG ATCTTCAACG AGGGCTATTC GGCGACGTCC
GGCGACGACC TGATGCGCCC GTCGCTGTGC CTGGAGGCGC TCCGGCTGGG CCGGCTGCTG
GCCGAGCTGG CGCCCCGGCA GGCCGAGGTC CACGGCCTGG TCGCGCTGAT GGAGATCCAG
GCGTCGCGTT CGGCCGCGCG GACCGGCCCC TCGGGCGAGC CCATCCAGCT CCACGAGCAG
AACCGCGGAC GCTGGGATCA GCTCCTCATC CGCCGCGGTT TCGCGGCGAT GTTACGGGCG
AAGGAGGCCG GGGGCCCGCC CGGCCCGTAT GTGCTGCAGG CCGCGATCGC CGTCTCGCAC
GCGCAGGCGA AGACCGCGCA GGAGACGGAC TGGGGTCAGA TCGCGGCCCT CTACGGAGCG
CTGGTCCGGC TGGTGCCGTC GCCCGTGGTC CAGCTCAACC GTGCCGTGGC GCTGGGGATG
GCCCGCGGGC CCCAGGCGGG GCTGGACATC GTCGACACGC TGACCTCCGA TCCCGCGCTC
AAGAACTACC ACCTGCTGTC CGGCGTGCGC GGCGACTTCC TGGCCAAGCT CGGACGGCAC
GACGAGGCCA GGACGGAGTT CGAGCGCGCG GCCTCGCTCA CTCACAACGC CCCCGAACGC
GCTTTCCTGC TCAGGCGGGC CGCTACCGGC ACAACCCCGG TGGCGGGAGT CACCCTGGGC
CAGGCCGCGG AGAGCTTCCT GGCCCGCGAG GACCTGGACG CCGGGACGAT CCGCTCCTAC
GGCCAGACCC TGCGCCGGAT GTGCCTGGAC CTTGGAGCCG GCACCCCGCT GGCCGAGGTG
ACCGCCGGGA AGTTGTCCAC GGTCTTCTCC GTCGCCTGGG ACGGGGCGGC GGCCAAGACC
TGGAACCGGC ACCGCGCGGC CGTCCGCTCC TTCTCCTCCT GGGCGTCCGT CGACGACCTC
TCCGCCGGAC TGGCCCGGAA GCCGGAGAGC CGCGAGCGCA GGCCGTCCAT CGGCCCGTCA
CAGCTCGACG CCCTCTGGGA GCGCCCGGGC ACGGCGCTAC GCGAGAAGGT GCTGTGGCGG
CTCCTCCACG AGTCGGCGGC CGCCGCCAGA ACGGCCCTGT CCCTCAACGT CGAAGACCTC
GACCTGGACG ACCGGCGCGG ACGCGTCGCC GCCAAGAACG GGCAGGTCTG GCTGTCCTGG
CAGTCCGGCA CCGCCCGCCT GTTACCCCAC CTCGTGGCGG GCCGGACGCG AGGCCCGCTG
TTCCTGGCCG ACCGGAGACC CGCACCGGCC CGGATGCCCG GACCCGCCGA CCTCTGCCCC
GACACCGGAC GGGGACGGCT CTCCTACGAA CGCGCCGAAT ACCTCTTCAA ACAGGCCACC
AGGCCGCTCG ACCCGTCAGG CGCGGGCTAC ACCCTCCACC AGCTCAGCCA CTCCCGCCCT
TGA
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| Protein sequence | MTPRGSAAPG LRTSRGGALI VPMTARNVHG AIDAVWKFES ARIIAGLTRM VRDVGLAEEL
AQDALVAALE QWPGQGVPDN PGAWLMTTAK RRAIDHLRRG ERLERKHEEI AHALEQQGLE
EGVDDDVLRL MFVSCHPVLP AEARAALTLR LLGGLTALEI ARAFLVSEQA VAQRIAKAKR
TLAEERVPFE LPPGPELAGR LASVLEVIYL IFNEGYSATS GDDLMRPSLC LEALRLGRLL
AELAPRQAEV HGLVALMEIQ ASRSAARTGP SGEPIQLHEQ NRGRWDQLLI RRGFAAMLRA
KEAGGPPGPY VLQAAIAVSH AQAKTAQETD WGQIAALYGA LVRLVPSPVV QLNRAVALGM
ARGPQAGLDI VDTLTSDPAL KNYHLLSGVR GDFLAKLGRH DEARTEFERA ASLTHNAPER
AFLLRRAATG TTPVAGVTLG QAAESFLARE DLDAGTIRSY GQTLRRMCLD LGAGTPLAEV
TAGKLSTVFS VAWDGAAAKT WNRHRAAVRS FSSWASVDDL SAGLARKPES RERRPSIGPS
QLDALWERPG TALREKVLWR LLHESAAAAR TALSLNVEDL DLDDRRGRVA AKNGQVWLSW
QSGTARLLPH LVAGRTRGPL FLADRRPAPA RMPGPADLCP DTGRGRLSYE RAEYLFKQAT
RPLDPSGAGY TLHQLSHSRP
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