Gene Sros_4218 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_4218 
Symbol 
ID8667512 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp4700580 
End bp4701776 
Gene Length1197 bp 
Protein Length398 aa 
Translation table11 
GC content77% 
IMG OID 
ProductSignal transduction histidine kinase-like protein 
Protein accessionYP_003339863 
Protein GI271965667 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0481493 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000385051 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAACGGCG ACATCCACTG CGGCGAAGGG GCGGGAGCCG CCCGCCCGCG CGCCCCCGGA 
ACCGGGATCC CCGCCGCGGT CATCATGGTC GTCGGGATGG GCGCCCTGGT CGCGCTGACG
ATCTGGGGCC TGTCCGACGC GCATCCGACG GGGGAGTCGC TGGGTCGTGA CATCGCGGCC
GGGGTGCTGG GATGCGTCCT GTCGCCGGTT CTGCTGCGGT GGCCGGTCAC CGGCGCGCTG
GGGCTCACGC TGCTGGCGGC GCTGTCGCCG GCGGCCACCC CGGCGGCCAC GCTGGGCGCG
CTGCTGGTCG CCCAGCGGCG CGGTTTCCCG GTCGCGGTCG CGGTGGCCGC GGCGGGGATC
GTGGCCCACG CGGTGCAGGG CACATGGCGG CCGAACGGGG GGATCTCCTT CGGCTGGTGG
CTGGTCCTGA TCACCGTCGG GTACGGCGCG CTGGTCGGCT GGGGCGCGCT GGCCCGGGCG
CGCCACGCGC TCGTCGCCTC GCTGCGCGAA CGCGCCCGCC GCGCCGAGGC CGAGCAGGGC
CGCCGGGTGG CCGAGGGCCG GATGCTCGAG CGGACCCGGA TCGCCCGGGA GATGCACGAC
GTGCTGGCCC ATCGGCTGTC CCTGCTGGCG ACGTACGCGG GTGCGTTGGA GTACCGCCCG
GACTCCCCGC CTGAGCAGCT CGCCCGTGCC GCGGGCGTGG TCCGCGCCGG AGCGCACCAG
GCACTCGACG AGCTCCGGGA CGTGATCAAC CTGCTGCGCG ACGAGGACAC GGTCGAGGGC
CACGAGCCCG ATGGACGGCC GCAGCCCGTG CTGGCCGACC TTCCCCGGCT GGTCGACGAG
TCCCGCGACG CCGGAGGCCG GGTGCGGCTG CGCAACGAGG TGGTCGACCC GGACGCCCTG
CCCGCCGCCG CCGGCCGGAC TGCCTACCGT GTCGTCCAGG AGGGGCTGAC CAACGCCCGC
AAGCACGCCA CGGGCCGGCC GGTCCAGGTG ATGCTGGAGG GCCGGCCGGG TGCCCGGCTC
GTGATCGACA TCCGCAACCC GCTGCCGGAG GACGGGGCCG CCACGTCGAT CACACCCGGC
ACCGGCACCG GCCTGGTCGG GCTGACCGAG CGGGTGCAAC TCGCCGGGGG GCGGCTCGAC
CACGAGGTGA CCGCCGGCGA GTTCCGCCTG CGCGCCTGGC TGCCGTGGCC GGCGTGA
 
Protein sequence
MNGDIHCGEG AGAARPRAPG TGIPAAVIMV VGMGALVALT IWGLSDAHPT GESLGRDIAA 
GVLGCVLSPV LLRWPVTGAL GLTLLAALSP AATPAATLGA LLVAQRRGFP VAVAVAAAGI
VAHAVQGTWR PNGGISFGWW LVLITVGYGA LVGWGALARA RHALVASLRE RARRAEAEQG
RRVAEGRMLE RTRIAREMHD VLAHRLSLLA TYAGALEYRP DSPPEQLARA AGVVRAGAHQ
ALDELRDVIN LLRDEDTVEG HEPDGRPQPV LADLPRLVDE SRDAGGRVRL RNEVVDPDAL
PAAAGRTAYR VVQEGLTNAR KHATGRPVQV MLEGRPGARL VIDIRNPLPE DGAATSITPG
TGTGLVGLTE RVQLAGGRLD HEVTAGEFRL RAWLPWPA