Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_4218 |
Symbol | |
ID | 8667512 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | + |
Start bp | 4700580 |
End bp | 4701776 |
Gene Length | 1197 bp |
Protein Length | 398 aa |
Translation table | 11 |
GC content | 77% |
IMG OID | |
Product | Signal transduction histidine kinase-like protein |
Protein accession | YP_003339863 |
Protein GI | 271965667 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0481493 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.000385051 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGAACGGCG ACATCCACTG CGGCGAAGGG GCGGGAGCCG CCCGCCCGCG CGCCCCCGGA ACCGGGATCC CCGCCGCGGT CATCATGGTC GTCGGGATGG GCGCCCTGGT CGCGCTGACG ATCTGGGGCC TGTCCGACGC GCATCCGACG GGGGAGTCGC TGGGTCGTGA CATCGCGGCC GGGGTGCTGG GATGCGTCCT GTCGCCGGTT CTGCTGCGGT GGCCGGTCAC CGGCGCGCTG GGGCTCACGC TGCTGGCGGC GCTGTCGCCG GCGGCCACCC CGGCGGCCAC GCTGGGCGCG CTGCTGGTCG CCCAGCGGCG CGGTTTCCCG GTCGCGGTCG CGGTGGCCGC GGCGGGGATC GTGGCCCACG CGGTGCAGGG CACATGGCGG CCGAACGGGG GGATCTCCTT CGGCTGGTGG CTGGTCCTGA TCACCGTCGG GTACGGCGCG CTGGTCGGCT GGGGCGCGCT GGCCCGGGCG CGCCACGCGC TCGTCGCCTC GCTGCGCGAA CGCGCCCGCC GCGCCGAGGC CGAGCAGGGC CGCCGGGTGG CCGAGGGCCG GATGCTCGAG CGGACCCGGA TCGCCCGGGA GATGCACGAC GTGCTGGCCC ATCGGCTGTC CCTGCTGGCG ACGTACGCGG GTGCGTTGGA GTACCGCCCG GACTCCCCGC CTGAGCAGCT CGCCCGTGCC GCGGGCGTGG TCCGCGCCGG AGCGCACCAG GCACTCGACG AGCTCCGGGA CGTGATCAAC CTGCTGCGCG ACGAGGACAC GGTCGAGGGC CACGAGCCCG ATGGACGGCC GCAGCCCGTG CTGGCCGACC TTCCCCGGCT GGTCGACGAG TCCCGCGACG CCGGAGGCCG GGTGCGGCTG CGCAACGAGG TGGTCGACCC GGACGCCCTG CCCGCCGCCG CCGGCCGGAC TGCCTACCGT GTCGTCCAGG AGGGGCTGAC CAACGCCCGC AAGCACGCCA CGGGCCGGCC GGTCCAGGTG ATGCTGGAGG GCCGGCCGGG TGCCCGGCTC GTGATCGACA TCCGCAACCC GCTGCCGGAG GACGGGGCCG CCACGTCGAT CACACCCGGC ACCGGCACCG GCCTGGTCGG GCTGACCGAG CGGGTGCAAC TCGCCGGGGG GCGGCTCGAC CACGAGGTGA CCGCCGGCGA GTTCCGCCTG CGCGCCTGGC TGCCGTGGCC GGCGTGA
|
Protein sequence | MNGDIHCGEG AGAARPRAPG TGIPAAVIMV VGMGALVALT IWGLSDAHPT GESLGRDIAA GVLGCVLSPV LLRWPVTGAL GLTLLAALSP AATPAATLGA LLVAQRRGFP VAVAVAAAGI VAHAVQGTWR PNGGISFGWW LVLITVGYGA LVGWGALARA RHALVASLRE RARRAEAEQG RRVAEGRMLE RTRIAREMHD VLAHRLSLLA TYAGALEYRP DSPPEQLARA AGVVRAGAHQ ALDELRDVIN LLRDEDTVEG HEPDGRPQPV LADLPRLVDE SRDAGGRVRL RNEVVDPDAL PAAAGRTAYR VVQEGLTNAR KHATGRPVQV MLEGRPGARL VIDIRNPLPE DGAATSITPG TGTGLVGLTE RVQLAGGRLD HEVTAGEFRL RAWLPWPA
|
| |