Gene Sros_4200 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_4200 
Symbol 
ID8667494 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp4674103 
End bp4676211 
Gene Length2109 bp 
Protein Length702 aa 
Translation table11 
GC content74% 
IMG OID 
ProductSerine phosphatase RsbU regulator of sigma subunit-like protein 
Protein accessionYP_003339845 
Protein GI271965649 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00190608 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.0466919 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCGGGAC GATTCCTTCC CCCGGACGGC GGGGACGGCC TGGCCGGGGA CCTCATCTCC 
ATGCTGGAGG ATGTCGGCGC CCACGCGGGA GCGATCTACC GCCTGGCCCC CGGCGGCCAG
GTGCTGGAAC TGACGGTGAT GGAGGGGTTG CCGCGGGAGT TCGCCCGGCC GTGGGAGCGG
GTGAGCCTGA CCGCTCCCGT CCCGGTGGCC GACGCCTCGC GGGAGGGGCG GCTGGTGTGG
GTGGGAGGCG AGGAGGACAT GGTGCGCTGC TACCCGGGCA TCGCGCTCGC CCTGCCCTAC
GACTTCCGCA TGGCCGCCCT GCCGCTTGCC ACCGCCACGG CCGACTACGG GGGGATGTTC
CTGCTCTGGC CCGGCTCCCA TCCCTCGCGG CTGTCCTCCG GCCAACGCGA CCGTCTCACG
GCCGCGGCCG CCCGCCTGGC GCGAGCGCTT GAGGAGTCCG GCCGGCCGGA CCCGCCGGGT
CCGGGGCCGC GCGCCCCCGT CCCGGCCGGC GCGGTTCCCC CCGGAGGGCT TGAGGCGATG
GTGGCACGGC TGCCGGAGGG GGTGTGCGCC CTGGACGACC ACGGCCGCCT CACCTTCATC
AGCCCGCGGG GAGCCGCGCT GATCGGCGAG TCGCCCCGGC GGCTGATCGG CGCCCAGCCC
TGGAGGGTGC TGCCCTGGCT GAACGATCCG GTGTACGAGG ACCGCTACCG CGCAGCGATG
ATCAGTCAGC AGCCGACCTC GTTCGTGGCG CTGTGCCCTC CGGACCGATG GCTGACCTTC
GACCTGTACC CGGCCGTCTC CGGCATCACC GTGCGCGTCA CCCCGGCTCT GGTGGAGCCG
GAGAACGTCC CGGTGCTCAC GTCGGCGGTC GACTCGGCGG TGCCCACCCG CGTCGGGGCG
ATCTACCACG TCCTGCATCT GGCGAGCGCG TTGACGGAGG CCGCCGGCGT GCAGGACGTG
GTGGGCCTGG TCGCCGACCA GATCATGCCT GCCTTCGGCG GCCAGGCCCT GGCCCTGCTG
GTCGCCGAGG ACGGCCGGCT GCGCGTGGCC GGCCACCGGG GCTACCCGCC CAACATCACC
GAGCAGTACG ACCGCCTCCC GCTGACCTCG CCCACCCCGA GCGTGCGGAC GATGGTCACC
GGGGTGCCCA GCTTCTTCGA GTCCCACGAG GAACTGGACC AGATCTACCC GATGGCCGTC
GCTCCGGACG ACGGGATGGC GGCCTGGGCG TTCATACCGC TGATCGCCTC GGGCCGGCCC
ATCGGCACCT GCGTGCTCGC CTTCTCCCGG CCCCACCGCT TCACCGTCGA GGAACGCGCT
CTGCTGACCT CGCTCGGCGG GCTGATCGCC CAGGCGCTGG AGCGCGCGCG TCTCTACGAC
GCCAAACTGG AGCTCGCCCA GTGCCTGCAG GAAAGCCTGC TGCCCCACGC CCTTCCCCTG
CTGCCCGGCC TGACCGCGGC CGCCCGTTAC CTGCCCAGCA CCGAAGGCAT GGACATCGGA
GGCGACTTCT ACGACGTCAT CCGGCTCACC GATGACACCG TCGCCGCCAT CATCGGCGAC
GTCCAAGGGC ACAACGTCAC CGCCGCGGCC CTCATGGGCC AGCTACGCAC CGCGGTGCGC
GCCTACGCCA CCACCGGCGC CGGTCCCGGC GAGGTCCTGG CCCGCACCAA CCGCCTGCTG
GCCGACCTGG ACCCCGGCCT GTTCGCCACC TGCGTCTACG TCCAGCTCGA CCTGCGCCGC
CGCACGGCGT GCCTGGCCCG CGCCGGCCAC CCCTACCCCC TCCTGCGCCA CCCCGACGGC
GGCGTCCGGG TACTGGACGT GCCCGGCGGC CTGCTGCTGG GACTCGACCC CGAGGCCGGG
TATCCGTGCA CGGAGATCCC CCTGCCGGCC GGCGCCGTCC TGGCCCTCTA CACCGACGGC
CTGATCGAGA CCCCCGGGAC CGATCTCGAC GACGCCCTGG CCGAACTCGG CATCGAGCTG
GCGCGCGTCG GCGACCAGCA CCTCGACGGG GTGGCCGACG CCATGATCCG GCACGCCCAG
CAGACCAGCC GCCGCGGCGA CGACATCGCC CTGCTGCTCC TGCGCCTCAC GGCCGAACTC
GGTCCCTGA
 
Protein sequence
MAGRFLPPDG GDGLAGDLIS MLEDVGAHAG AIYRLAPGGQ VLELTVMEGL PREFARPWER 
VSLTAPVPVA DASREGRLVW VGGEEDMVRC YPGIALALPY DFRMAALPLA TATADYGGMF
LLWPGSHPSR LSSGQRDRLT AAAARLARAL EESGRPDPPG PGPRAPVPAG AVPPGGLEAM
VARLPEGVCA LDDHGRLTFI SPRGAALIGE SPRRLIGAQP WRVLPWLNDP VYEDRYRAAM
ISQQPTSFVA LCPPDRWLTF DLYPAVSGIT VRVTPALVEP ENVPVLTSAV DSAVPTRVGA
IYHVLHLASA LTEAAGVQDV VGLVADQIMP AFGGQALALL VAEDGRLRVA GHRGYPPNIT
EQYDRLPLTS PTPSVRTMVT GVPSFFESHE ELDQIYPMAV APDDGMAAWA FIPLIASGRP
IGTCVLAFSR PHRFTVEERA LLTSLGGLIA QALERARLYD AKLELAQCLQ ESLLPHALPL
LPGLTAAARY LPSTEGMDIG GDFYDVIRLT DDTVAAIIGD VQGHNVTAAA LMGQLRTAVR
AYATTGAGPG EVLARTNRLL ADLDPGLFAT CVYVQLDLRR RTACLARAGH PYPLLRHPDG
GVRVLDVPGG LLLGLDPEAG YPCTEIPLPA GAVLALYTDG LIETPGTDLD DALAELGIEL
ARVGDQHLDG VADAMIRHAQ QTSRRGDDIA LLLLRLTAEL GP