Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_4200 |
Symbol | |
ID | 8667494 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | - |
Start bp | 4674103 |
End bp | 4676211 |
Gene Length | 2109 bp |
Protein Length | 702 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | |
Product | Serine phosphatase RsbU regulator of sigma subunit-like protein |
Protein accession | YP_003339845 |
Protein GI | 271965649 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00190608 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.0466919 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCGGGAC GATTCCTTCC CCCGGACGGC GGGGACGGCC TGGCCGGGGA CCTCATCTCC ATGCTGGAGG ATGTCGGCGC CCACGCGGGA GCGATCTACC GCCTGGCCCC CGGCGGCCAG GTGCTGGAAC TGACGGTGAT GGAGGGGTTG CCGCGGGAGT TCGCCCGGCC GTGGGAGCGG GTGAGCCTGA CCGCTCCCGT CCCGGTGGCC GACGCCTCGC GGGAGGGGCG GCTGGTGTGG GTGGGAGGCG AGGAGGACAT GGTGCGCTGC TACCCGGGCA TCGCGCTCGC CCTGCCCTAC GACTTCCGCA TGGCCGCCCT GCCGCTTGCC ACCGCCACGG CCGACTACGG GGGGATGTTC CTGCTCTGGC CCGGCTCCCA TCCCTCGCGG CTGTCCTCCG GCCAACGCGA CCGTCTCACG GCCGCGGCCG CCCGCCTGGC GCGAGCGCTT GAGGAGTCCG GCCGGCCGGA CCCGCCGGGT CCGGGGCCGC GCGCCCCCGT CCCGGCCGGC GCGGTTCCCC CCGGAGGGCT TGAGGCGATG GTGGCACGGC TGCCGGAGGG GGTGTGCGCC CTGGACGACC ACGGCCGCCT CACCTTCATC AGCCCGCGGG GAGCCGCGCT GATCGGCGAG TCGCCCCGGC GGCTGATCGG CGCCCAGCCC TGGAGGGTGC TGCCCTGGCT GAACGATCCG GTGTACGAGG ACCGCTACCG CGCAGCGATG ATCAGTCAGC AGCCGACCTC GTTCGTGGCG CTGTGCCCTC CGGACCGATG GCTGACCTTC GACCTGTACC CGGCCGTCTC CGGCATCACC GTGCGCGTCA CCCCGGCTCT GGTGGAGCCG GAGAACGTCC CGGTGCTCAC GTCGGCGGTC GACTCGGCGG TGCCCACCCG CGTCGGGGCG ATCTACCACG TCCTGCATCT GGCGAGCGCG TTGACGGAGG CCGCCGGCGT GCAGGACGTG GTGGGCCTGG TCGCCGACCA GATCATGCCT GCCTTCGGCG GCCAGGCCCT GGCCCTGCTG GTCGCCGAGG ACGGCCGGCT GCGCGTGGCC GGCCACCGGG GCTACCCGCC CAACATCACC GAGCAGTACG ACCGCCTCCC GCTGACCTCG CCCACCCCGA GCGTGCGGAC GATGGTCACC GGGGTGCCCA GCTTCTTCGA GTCCCACGAG GAACTGGACC AGATCTACCC GATGGCCGTC GCTCCGGACG ACGGGATGGC GGCCTGGGCG TTCATACCGC TGATCGCCTC GGGCCGGCCC ATCGGCACCT GCGTGCTCGC CTTCTCCCGG CCCCACCGCT TCACCGTCGA GGAACGCGCT CTGCTGACCT CGCTCGGCGG GCTGATCGCC CAGGCGCTGG AGCGCGCGCG TCTCTACGAC GCCAAACTGG AGCTCGCCCA GTGCCTGCAG GAAAGCCTGC TGCCCCACGC CCTTCCCCTG CTGCCCGGCC TGACCGCGGC CGCCCGTTAC CTGCCCAGCA CCGAAGGCAT GGACATCGGA GGCGACTTCT ACGACGTCAT CCGGCTCACC GATGACACCG TCGCCGCCAT CATCGGCGAC GTCCAAGGGC ACAACGTCAC CGCCGCGGCC CTCATGGGCC AGCTACGCAC CGCGGTGCGC GCCTACGCCA CCACCGGCGC CGGTCCCGGC GAGGTCCTGG CCCGCACCAA CCGCCTGCTG GCCGACCTGG ACCCCGGCCT GTTCGCCACC TGCGTCTACG TCCAGCTCGA CCTGCGCCGC CGCACGGCGT GCCTGGCCCG CGCCGGCCAC CCCTACCCCC TCCTGCGCCA CCCCGACGGC GGCGTCCGGG TACTGGACGT GCCCGGCGGC CTGCTGCTGG GACTCGACCC CGAGGCCGGG TATCCGTGCA CGGAGATCCC CCTGCCGGCC GGCGCCGTCC TGGCCCTCTA CACCGACGGC CTGATCGAGA CCCCCGGGAC CGATCTCGAC GACGCCCTGG CCGAACTCGG CATCGAGCTG GCGCGCGTCG GCGACCAGCA CCTCGACGGG GTGGCCGACG CCATGATCCG GCACGCCCAG CAGACCAGCC GCCGCGGCGA CGACATCGCC CTGCTGCTCC TGCGCCTCAC GGCCGAACTC GGTCCCTGA
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Protein sequence | MAGRFLPPDG GDGLAGDLIS MLEDVGAHAG AIYRLAPGGQ VLELTVMEGL PREFARPWER VSLTAPVPVA DASREGRLVW VGGEEDMVRC YPGIALALPY DFRMAALPLA TATADYGGMF LLWPGSHPSR LSSGQRDRLT AAAARLARAL EESGRPDPPG PGPRAPVPAG AVPPGGLEAM VARLPEGVCA LDDHGRLTFI SPRGAALIGE SPRRLIGAQP WRVLPWLNDP VYEDRYRAAM ISQQPTSFVA LCPPDRWLTF DLYPAVSGIT VRVTPALVEP ENVPVLTSAV DSAVPTRVGA IYHVLHLASA LTEAAGVQDV VGLVADQIMP AFGGQALALL VAEDGRLRVA GHRGYPPNIT EQYDRLPLTS PTPSVRTMVT GVPSFFESHE ELDQIYPMAV APDDGMAAWA FIPLIASGRP IGTCVLAFSR PHRFTVEERA LLTSLGGLIA QALERARLYD AKLELAQCLQ ESLLPHALPL LPGLTAAARY LPSTEGMDIG GDFYDVIRLT DDTVAAIIGD VQGHNVTAAA LMGQLRTAVR AYATTGAGPG EVLARTNRLL ADLDPGLFAT CVYVQLDLRR RTACLARAGH PYPLLRHPDG GVRVLDVPGG LLLGLDPEAG YPCTEIPLPA GAVLALYTDG LIETPGTDLD DALAELGIEL ARVGDQHLDG VADAMIRHAQ QTSRRGDDIA LLLLRLTAEL GP
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