Gene Sros_4189 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_4189 
Symbol 
ID8667483 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp4662724 
End bp4663833 
Gene Length1110 bp 
Protein Length369 aa 
Translation table11 
GC content75% 
IMG OID 
Product3-oxoacyl-(acyl-carrier-protein) synthase-like protein 
Protein accessionYP_003339836 
Protein GI271965640 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.731881 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGACCA TGACGACCGT CGCCCCGCTC GTGATCACCG GCTGCGGGGT GGTCTCTCCC 
GCGGGTGTCG GCCTGGAGCC GCTCGCCGGC GCGATGAGCG GGGGCGGGTG CGAGGAGGCC
GATCTGGAGG CGATCGGCGG GGAGTTCCCG CCCATGCCGC TGGCCGCGAC GCCGGACCTC
CGGCCGGAGG AGTACCTGGG CAGGAAGGGG ATCCGGTCCC TGGACCGGAC CACGCAGCTG
GCTCTGGTGG CGAGCAACCG GGCGCTGGCG GGGCTCGGCG CGCCGCTGGC GGACCAGGAC
CGCGCGCGGA CCGGCGTGGT GATCGGGACC AGTACGGGCA GCATCCGCAG CTCCAGCGAG
TTCTCGCGCG AGACGCTCGT GCGGGAGAAG CCGTATCTGG TGCGGGCCAG CTTCTTCCCC
AACTCGGTGA TGAACTTCTG CGCGAGCCAG ATCGCGATCT GGAACGCGCT CCGCGGCGTG
AACGCGACGA TCGCCGACGG CCGGGTGTCG GGTCTGGCCG CGGTCCGGTA CGCCCGCAAC
GCGATCGTCC AGGGTCACGT CGACCGCGCC CTGGTCGGCG CGGTGGAGGA GCTGTGCCCC
CAGTCCGCAT GGGCCTGGTA CCTGTCGGGC GCGCTCACGC CGGCCGCGGC CGTCGGCGAG
GGAGCCGCGG TGTTCGTCGT CGAGACGTCC GAGGGTGCCG CCGCGGCCGG CCGGGCGCCG
CTGGCCGAGC TGCTCGCCTG CGAGGTCGGC ACCCTGGGCA TGTCCGATGT GCGCCGCGGC
CTGGCCGTGT GCGTCGAGCG CGCCCTGCGG CGCAGCGGCG TGCCCGGTGA GGCGGTCACC
GCGGTCTCGT TGAGCGCGAC CGGCCTGCGC GGCCTGGGAG CGGCCGAGGA GGACGGCGTC
CGCGGCGCCC TGGGCGCCCT GCCGCCCCAC CAGATCAGGA CCGCCGCTCT GATGGGCGAG
AGCTTCAGCG CGAGCGGCGC TCTGCAGATC GCCGGGCTGC TCGCGGGGTG GCGGGCCAAC
GGCGCCGCCA TGGGCCCCGT GGCCCTGGTG ACCTCCGTCG GGGACGACGG CAACGTCGGC
TGCCTGGTGG TGCGCCGCCC CGCTCTCTGA
 
Protein sequence
MTTMTTVAPL VITGCGVVSP AGVGLEPLAG AMSGGGCEEA DLEAIGGEFP PMPLAATPDL 
RPEEYLGRKG IRSLDRTTQL ALVASNRALA GLGAPLADQD RARTGVVIGT STGSIRSSSE
FSRETLVREK PYLVRASFFP NSVMNFCASQ IAIWNALRGV NATIADGRVS GLAAVRYARN
AIVQGHVDRA LVGAVEELCP QSAWAWYLSG ALTPAAAVGE GAAVFVVETS EGAAAAGRAP
LAELLACEVG TLGMSDVRRG LAVCVERALR RSGVPGEAVT AVSLSATGLR GLGAAEEDGV
RGALGALPPH QIRTAALMGE SFSASGALQI AGLLAGWRAN GAAMGPVALV TSVGDDGNVG
CLVVRRPAL