| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_4184 |
|---|
| Symbol | |
|---|
| ID | 8667478 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | - |
|---|
| Start bp | 4657260 |
|---|
| End bp | 4658246 |
|---|
| Gene Length | 987 bp |
|---|
| Protein Length | 328 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | |
|---|
| Product | daunorubicin resistance ABC transporter ATP- binding subunit |
|---|
| Protein accession | YP_003339831 |
|---|
| Protein GI | 271965635 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.00696491 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGGAGC TCACGATCGA GGCGCGGGGA CTGGTCAAGC GTTTTGGCAG GAAAACGGCT
CTGGACGGGC TTGATCTCGC GGTCGAACCG GGACAGGTCG TGGCGGTCCT GGGCCCCAAC
GGCGCCGGGA AGACGACATT CGTCCGGGCG GTGGCGACCC TGCTGCGCCT CGACGGCGGC
ACGCTGCGGG TGGCGGGCTT CGATGTGCGG CGCGAGCCGG AGGAGGTCCG CCGCGCGATC
GGGCTCGCGG GCCAGTACGC CTCGGTGGAG CCGGCCATGA CCGGACGGGA GAACCTGGAG
ATGGTGGCGC GGCTCTACGG CCAGCCGGCC CGTACGGCCC GTACCAGCGC CGCACGCGTC
CTTGAGCGTT TCGGCCTCGC GGGTGACGCC GACCGGCTCG CGCGGACCTA TTCGGGCGGG
ATGCGGCGCA AGCTGGACCT GGGAGCCAGC CTGGTGAGCA CGCCCCGCCT GCTGCTGCTG
GACGAGCCGA CGACCGGCCT GGACCCGCGC TCCCGCATCG AGCTGTGGGA CGCGATCGAC
GGTCTCGTCG AACAAGGCAC CGACGTGCTG CTCACCACCC AGTACCTGGA CGAGGCGGAA
CGCCTGGCCG GCCACATCGT GATCATCGAC CACGGGCGGG CGGTGGCCTC CGGGCCCCCC
GCCGAGCTGA AGCGGCGTGT CGGCGGCAAC GTGCTGGAGG TGCACGTGCG CGACCGCGCG
GACCTGGCGG CGGTCGCCGC CGCCCTGGCC CACCCCGGTC ACGCCGCGCC CCAGGTCGAC
GAGGCGACCC GCCGCGTCAG CGTGGGCGCG GGCGACGGGG ACGCCGTCGG GGGGCTGCTC
GCCGGCCTGC GGGCCGTCGA GGACACGGGG GTGGAGCTCT CCGGCGTCAG CGTGCGCCAG
CCCGGCCTCG AAGAGGTCTT CCTCGCGCTG ACCGGCCAGG ACGCGGTGGA CGGGACGCTC
GGCGCACGCG GTGAGGCGAT GCGGTGA
|
|---|
| Protein sequence | MAELTIEARG LVKRFGRKTA LDGLDLAVEP GQVVAVLGPN GAGKTTFVRA VATLLRLDGG
TLRVAGFDVR REPEEVRRAI GLAGQYASVE PAMTGRENLE MVARLYGQPA RTARTSAARV
LERFGLAGDA DRLARTYSGG MRRKLDLGAS LVSTPRLLLL DEPTTGLDPR SRIELWDAID
GLVEQGTDVL LTTQYLDEAE RLAGHIVIID HGRAVASGPP AELKRRVGGN VLEVHVRDRA
DLAAVAAALA HPGHAAPQVD EATRRVSVGA GDGDAVGGLL AGLRAVEDTG VELSGVSVRQ
PGLEEVFLAL TGQDAVDGTL GARGEAMR
|
|---|
| |