| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_4166 |
|---|
| Symbol | |
|---|
| ID | 8667460 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | + |
|---|
| Start bp | 4636944 |
|---|
| End bp | 4637789 |
|---|
| Gene Length | 846 bp |
|---|
| Protein Length | 281 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | |
|---|
| Product | nucleotide-diphosphate-sugar epimerase |
|---|
| Protein accession | YP_003339813 |
|---|
| Protein GI | 271965617 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.013923 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCGTGG TGTTCGGATC CACCGGCAAT GTGGGGCGGC ACGTCGTGAC CGGGCTGGTG
GCCGCCGGTG AACGGGTACG CGCGTTCACC CGCGACCCCG CCCGCGCCCG GTTCGACGAG
AGCGTGGAGG TCGTCGCGGG AGATCTCAGG GACCCCGGCA CCGTGCTCGC CGCGCTCACC
GGTGCGGACG GCGTCTACGT GGCGACCAGC CCTGACGCGC TGGCACACGA ACTCGCCGTG
GCCGCAGCGC TGCGCCGGTC CGGGGCCGGC CGGGTGGTGA AGCTGTCGTC CGTCGCCGCC
AACGCGCCGG TGACCGACTC CTACGGGGCG GCGCACGCGG CCGCCGAGAA CGCCTTCATG
GACTCGGGCG CCGAGTGGAC CGTGTTGCGT CCGGCCGGAT ACATGTCGAA CGTGCTGCAG
TGGAGATCGT CGATCACATC GCAGGGCAGG GTCTACCAGC CCTACGGCAA GGTCCGGCGG
GCCGTGATCG ATCCGGAGGA CGTGGCCGCC GTCGCGGTCG CCTGCCTGAC GACGGCCGGC
CATCACGGAA AGGCCTACCA GCTCACCGGG CCCGAGGCGC TGACGGCACC CCAGCAGACG
GCCAGGGTCT CCGTCGCGCT CGGCCGCCCG CTGGAGTTCG TCGACGTCGA TCCGGAGCAG
GCCAGGAACG GCATGATCCG CGCGGGGATG CCGCCGGAGC TCGTGGACGG GCTCCTCTCC
TCGATGGCGG ATCCCGGCCC GCTACGGGGC GGCACGCCGC AATCCACCGT GCGGCAGATC
ACCGGCCGCC CACCGGCGAC GTTCGACTCC TGGCTGGCCC GGCATCTGAC GGAACTCCAC
GGCTGA
|
|---|
| Protein sequence | MIVVFGSTGN VGRHVVTGLV AAGERVRAFT RDPARARFDE SVEVVAGDLR DPGTVLAALT
GADGVYVATS PDALAHELAV AAALRRSGAG RVVKLSSVAA NAPVTDSYGA AHAAAENAFM
DSGAEWTVLR PAGYMSNVLQ WRSSITSQGR VYQPYGKVRR AVIDPEDVAA VAVACLTTAG
HHGKAYQLTG PEALTAPQQT ARVSVALGRP LEFVDVDPEQ ARNGMIRAGM PPELVDGLLS
SMADPGPLRG GTPQSTVRQI TGRPPATFDS WLARHLTELH G
|
|---|
| |