Gene Sros_4162 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_4162 
Symbol 
ID8667456 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp4632201 
End bp4633202 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content71% 
IMG OID 
ProductCoenzyme F420-dependent N5 N10-methylene tetrahydromethanopterin reductase-like protein 
Protein accessionYP_003339809 
Protein GI271965613 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.945898 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.398456 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAACTAG GCGCGATCAT AGAGTGGATG GACGACCTCT CCACATTCCG GAATCTGGTC 
CGGCTGACCG ACGATCTCGG ATATGACGTC ATCGGGGTCG GGGACACACC GGCCCGCGCA
TACGAGTTGT ACGTGTCGCT CACGGTGGCG GCGCAGGAGA GCCGGAACGC GATTCTGACG
CCGATGGTCA CCACGCCGTT CCTCCGCCAC CCGGCCGCCA CCGCCACCGC GATCTCCACG
TTGCACGAGC TGACGGGGGG CCGCGTCATG CTCGCCGTCG GGAACGGCGG CAGCACCAGG
CGGGTCGTCG GACGGTCCCC GGTGGGGACG CCACAGGAAC TGCACGACTA CGTCACGGCG
GTACGGGCGA TCCTCGACGG CGGCACGGCA CATGTCGACG GCCACACCAC CGAGCCGCTC
ACCCGGGTCC ATCCCATGCC GGTGTACCTC GCCGCGGACT ACCCCAGGAG CCTGCGACTG
GCGGGCGAGA TCGCCGACGG GGTGGTCACC ACCGTCGGCA TGTCGGCCGA GCTCGTCGAG
CGGAAGGTGG CGACGGTCCG GGCGGCGGCG GAGAAGGCCG GGCGCGATCC CGAGGCGATC
GAGATCTGGG GGTTCAGCTT CATCTCGGTC AAGGACACCC GCGCGGAGGC GAACGCCGAG
CTCGGCGCGG CCCTCGCCTC CGACGTGGCC CTGCGCCTGA AGGCGCCGCA CATGCGGGCG
CTCATCCCCC CCGACCTGCT GGGCGCGGTC GAGGAGATGG AGCGCCGCTA CGACGTCTGG
GACTTCGCCG TCGGAGGGAA GAACGCGAGG CTGCTGGAGG AGCTGGGACT CGTCGACTTC
GCGGCCGGGC TGACCGGCGT GACCGGGGAC GTCCCCGAGG TGGCCGCCCA CCTGAAGCGG
CTGGAGTCGA TCGGCGTGTC GGGGGTGTTC GCGGCGCTCC CCGTTCTCGC CGACCCGGAG
GGGACGCTCC GCCGGCTCGG CCGGGCGGCG GCCTCCGCCT GA
 
Protein sequence
MKLGAIIEWM DDLSTFRNLV RLTDDLGYDV IGVGDTPARA YELYVSLTVA AQESRNAILT 
PMVTTPFLRH PAATATAIST LHELTGGRVM LAVGNGGSTR RVVGRSPVGT PQELHDYVTA
VRAILDGGTA HVDGHTTEPL TRVHPMPVYL AADYPRSLRL AGEIADGVVT TVGMSAELVE
RKVATVRAAA EKAGRDPEAI EIWGFSFISV KDTRAEANAE LGAALASDVA LRLKAPHMRA
LIPPDLLGAV EEMERRYDVW DFAVGGKNAR LLEELGLVDF AAGLTGVTGD VPEVAAHLKR
LESIGVSGVF AALPVLADPE GTLRRLGRAA ASA