Gene Sros_4157 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_4157 
Symbol 
ID8667451 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp4625321 
End bp4625989 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content71% 
IMG OID 
Productputative transcriptional activator, TenA family 
Protein accessionYP_003339804 
Protein GI271965608 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.039549 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACGACG AGCTGTCGGC GATCGCCGGA CCCATACTGG CCCGGATCAG GGAGCATCCC 
TTCTGGGCCG GACTGCGCGA CGGCACGCTG CCGTCGGCCT CGCTGTGGTA CTTCGCCGAG
CAGGACGCCC GCCATGTCGT CCCCGCGTAC GCGCGGGCAC TGGCCCGCTG CGGCGCGGTC
GCCGACCAGG ACGCGCACGG CGCGCTGCTC TGCTCGGCGG CCAGTGCCAC GTTCGGCTCG
CTCTCCCGGC TGGACAGCGA GCTGACCAAG CTGGCGGAGG CGCTCGGCAA GCCGCCGGGC
GCCGCCGCCG TCACACCCGC CCCGCCGATC CACGCGCACA CCTCCTTCAT GCTCGCGGCG
CCCGCCGTCT CGTTCGCCTC CGGCGTCGGC GGGCTCCTGC CCATGACCTG GTTCCACCTC
GAGGTCTCCA ACGATCTGAG GGAACGGTAC GAACCCGGGT CCCGCTACGC CGCCTGGATC
GACCAGTACT GCCCCGAAGG CGGCTTCTAC CAGGAGTACG TCGCGGCGTA CCTGGACATG
GTCGACGAGG TGGGCGGGCA GTGCTCGGCC GGCGAGCGGG AGCGGCTCGT CGACCATTTC
CTGCTCGGTG CTCGCTATGA GTTTTCGTTC GCTGACGCAG CGTGGCAGCG GAAGGGGTGG
TTGATGTAG
 
Protein sequence
MHDELSAIAG PILARIREHP FWAGLRDGTL PSASLWYFAE QDARHVVPAY ARALARCGAV 
ADQDAHGALL CSAASATFGS LSRLDSELTK LAEALGKPPG AAAVTPAPPI HAHTSFMLAA
PAVSFASGVG GLLPMTWFHL EVSNDLRERY EPGSRYAAWI DQYCPEGGFY QEYVAAYLDM
VDEVGGQCSA GERERLVDHF LLGARYEFSF ADAAWQRKGW LM