| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_4150 |
|---|
| Symbol | |
|---|
| ID | 8667444 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | + |
|---|
| Start bp | 4619112 |
|---|
| End bp | 4620380 |
|---|
| Gene Length | 1269 bp |
|---|
| Protein Length | 422 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | |
|---|
| Product | 3-oxoacyl-(acyl-carrier-protein) synthase II |
|---|
| Protein accession | YP_003339797 |
|---|
| Protein GI | 271965601 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0596786 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.00141331 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | ATGGTCAACG ACAGGCGCGT CGTCATCACC GGGATCGGCG TGACGGCGCC GGGCGGCATC
GGGACCAAGG CGTTCTGGGA GCTGCTCACG GCCGGCCGTA CCGCCACCCG TAACATCACG
CTGTTCGACG CGTCCGGGTT CCGCTCCCGC ATCGGGGCGG AGTGCGACTT CGATCCCGCC
GCGGAGGGCC TGAGCCCGCA GGAGATCCGG CGGATGGACC GGGCCGCGCA GTTCGGCGTC
GTGTGCGCCA GGGAGGCCCT GGCCGACAGC GGCCTGGAGG AGGGCGCGGT CCCGCCGGAG
CGGATCGGCG TCAGCATCGG CAGCGCCGTG GGCTGCACGA TGGGCCTTGA GCAGGAGTAC
GTCGTGCTGA GCGACGGCGG CCGGCGCTGG CTCGTCGACC CCGCCTACGC GGTGCAGCAC
CTGTACGGCT ACATGGTGCC GAGCACGATG GCGTGCGAGG TCGCGTGGGC GGCGGGGGCC
GAGGGGCCGG TGTCGCTGAT CTCCACCGGG TGCACGGCGG GGCTGGACGC GGTCGGCAAC
GGCTGCCAGC TGATCTGGAC GGGCCGGGCC GACGTCGTGA TCGCCGGAGC CACCGACGCG
CCGCTCTCGC CGATCACGTC GGCGTGCTTC GACGCGATCA AGGCGACCTC GCCGAACAAC
GACGACCCGG CACATGCCTC CCGGCCGTTC GACGCCGATC GGGACGGGTT CGTGCTCGGA
GAGGGCGCCG CCGTCTTCGT GCTGGAGGAG CGGGAGGCCG CGCGCCGGCG CGGAGCGCAC
ATCTACGCGG AGATCGTCGG GTTCGCCGGC CGCAGCAACG CCTACCACAT GACCGGTCTC
AAGCCCGACG GGCGCGAGAT GGCCGAGGCG ATCCGCCAGG CCATGCACCT GGGGCGCGTG
GACGCCGCGG ACATCGACTA CATCAACGCG CACGGTTCGG GCACCAAGCA GAACGACAGG
CACGAGACCG CGGCCTTCAA GCGCGCGCTC GGCCAGCGTG CCTACGAGGT GCCGGTCAGC
TCCATCAAGT CGATGATCGG GCACTCGCTC GGGGCCATCG GGGCGATCGA GGTGGCCGCC
TGCGCGCTGG CCATCGAGCA CCAGGTGGTG CCGCCGACGG CGAACCTGCA CACCCGCGAT
CCCGAGTGCG ACCTGGACTA CGTGCCGCTG ACCGCGCGTG AGCACCCGAT CGACTCCGTG
CTCAGCGTCG GCAGCGGGTT CGGCGGCTTC CAGACCGCCA TGGTCATCGT GCGGGACCGG
GCGGCATGA
|
|---|
| Protein sequence | MVNDRRVVIT GIGVTAPGGI GTKAFWELLT AGRTATRNIT LFDASGFRSR IGAECDFDPA
AEGLSPQEIR RMDRAAQFGV VCAREALADS GLEEGAVPPE RIGVSIGSAV GCTMGLEQEY
VVLSDGGRRW LVDPAYAVQH LYGYMVPSTM ACEVAWAAGA EGPVSLISTG CTAGLDAVGN
GCQLIWTGRA DVVIAGATDA PLSPITSACF DAIKATSPNN DDPAHASRPF DADRDGFVLG
EGAAVFVLEE REAARRRGAH IYAEIVGFAG RSNAYHMTGL KPDGREMAEA IRQAMHLGRV
DAADIDYINA HGSGTKQNDR HETAAFKRAL GQRAYEVPVS SIKSMIGHSL GAIGAIEVAA
CALAIEHQVV PPTANLHTRD PECDLDYVPL TAREHPIDSV LSVGSGFGGF QTAMVIVRDR
AA
|
|---|
| |