Gene Sros_4143 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_4143 
Symbol 
ID8667437 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp4612804 
End bp4613541 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content72% 
IMG OID 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_003339790 
Protein GI271965594 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0128368 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGATCTTG GACTGGCCGG CAAACGTGTC CTCGTCACCG GTGGCACTCA CGGGATAGGC 
CGGGAGACCG TGCTCGCGTT CGCCCGGGCC GGGGCCTGCG TCGTGGCCTG CAACCGCAGC
CCGGGCGACG CGGCCGACGA CCTCGCCCGT GAGCTGAAGG GACTGGGCGA CGGCCACCGC
GTGGTGCAGG CCGACGTCAC CGACACCGCC GGCGTGGCCG CGCTCGCGGA CGCCTGCCGG
GAGGCTCTCG GCGGGCTCGA CGTGGTCGTC AACAACGTCG GCGTCGACGG CCGGTCGCCG
TTCGGGGAGC TCACCGGGGA GAAATGGCAC CGGGTCATCG AGACGAACCT GACCAGTTGC
TTCCTGGTGA CCCAGGCCGC GCTCGGGTTA CTGGCCGACA ACGGCTCGAT CGTCAACATC
GGAGCTTCGG CCGGCATGCG CGGGCGGCCG GAGAGCGCGC ACTACGGCGC CTCCAAGACA
GCTCTCATCG GGCTGAGCCG GTCACTGGCC AGGGAGCTCG GAGGCCGCGG CATCCGGGTC
AACACGGTGG CGCCCGGCGT GATCGTGACC GAACCCGGAG GCGGGCCGCC GCCCCCGGTC
GCCGACCTCA TCCGCGCCGT GACCGCGCTC GGCCGCCTGG GCACCAGCGC CGACGTGGCC
GCGGCCGTGC TGTTCCTGGC CAGCGACGTG TCCCGGTACA TCACCGGTGT CACTCTCAAC
GTGGACGGAG GCATCTGA
 
Protein sequence
MDLGLAGKRV LVTGGTHGIG RETVLAFARA GACVVACNRS PGDAADDLAR ELKGLGDGHR 
VVQADVTDTA GVAALADACR EALGGLDVVV NNVGVDGRSP FGELTGEKWH RVIETNLTSC
FLVTQAALGL LADNGSIVNI GASAGMRGRP ESAHYGASKT ALIGLSRSLA RELGGRGIRV
NTVAPGVIVT EPGGGPPPPV ADLIRAVTAL GRLGTSADVA AAVLFLASDV SRYITGVTLN
VDGGI