Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_4127 |
Symbol | |
ID | 8667421 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | - |
Start bp | 4598755 |
End bp | 4599675 |
Gene Length | 921 bp |
Protein Length | 306 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | |
Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
Protein accession | YP_003339774 |
Protein GI | 271965578 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.107679 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.0597058 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGGACGG CCGGCACGAG CATCGATGAG ATGGCCGGTG AGCGACGCCA GCTGATCAAT GTCGCCTACC GGTTGCTCGG TTCACTGGCC GAGTCCGAGG ACGCCGTACA GGAGGCCTAC GCGCGCTGGT ACGCGCTGCC ACGAAGCCGG CAGGACGAGA TCGTGTCCCC CGGCGCCTGG CTGACGACGG TGACCAGCCG CATCTGCCTG GACGTGCTCG GCTCGGCGCG GGCCCGGCGT GAACGCTATG TCGGCGCGTG GTTGCCCGAC CCGCTGCCCG ACCACGCCGA GTGGGACCAC AGCCATGGCA CCGACCCCGC CGACCAGATG GTCCTGGACG AATCGGTGAC CATGGCCTTC CTCGTCGTCC TGGAGTCGAT GACACCCGCC GAGCGGGTGG CGTTCGTCCT GCACGACGTC TTCCGATACC CCTTCGCCGA GATCGCCGAC ATCCTCGGCC GGACCCCTGC GGCCTGCAAG CAGCTCGCGG CGTCCGGCCG TCGGCGGGTG CGCGTCGCAC AGGCTCCGGT GACGGCGGCC GGGCAGGCCG ACACGGTGCG GCATGTCAAA GAGGCATGGG AGACCAAGGA CATCGCGGCC CTCGTCGACC TCCTCGACCC GGCCGCCGTG ATGACCGCCG ACGGCGGCGG CATGGTCGGT ACCGTCCTAC GCCCGATCGA AGGCGGTGCG CGCATCGCCC AGTACATGGT CGCCATCGCC GACAAGGCTC CGGGGCTCGA ACTCCTGGAG CGGTCGGTCA GCGGTGTGCC GGGCCTGGTG GCCCGGCATG CCGGCGCCGT CACGACCGTA GCCTCGTTCG ATGTCGCCGA CGGCCGCGTC ACCCGGATCT GGGCGGTCCG CAATCCGGAA AAGCTGCGGC CGTGGGTGCG GGAGGGCGGA CCTGTCCGGC CGATCATGTG A
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Protein sequence | MGTAGTSIDE MAGERRQLIN VAYRLLGSLA ESEDAVQEAY ARWYALPRSR QDEIVSPGAW LTTVTSRICL DVLGSARARR ERYVGAWLPD PLPDHAEWDH SHGTDPADQM VLDESVTMAF LVVLESMTPA ERVAFVLHDV FRYPFAEIAD ILGRTPAACK QLAASGRRRV RVAQAPVTAA GQADTVRHVK EAWETKDIAA LVDLLDPAAV MTADGGGMVG TVLRPIEGGA RIAQYMVAIA DKAPGLELLE RSVSGVPGLV ARHAGAVTTV ASFDVADGRV TRIWAVRNPE KLRPWVREGG PVRPIM
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