Gene Sros_4118 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_4118 
Symbol 
ID8667412 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp4576878 
End bp4577804 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content70% 
IMG OID 
ProductMembrane protease subunits stomatin/prohibitin 
Protein accessionYP_003339767 
Protein GI271965571 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.119159 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.0618424 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCACCG TCGTCACCTC CGCACTGATC GCGATCCTGA CACTGGGCGC GATGTTGCTC 
GGGACGAGTG TCCGGATCGT CAAGCAGTTC GAGCGGGGCG TCGTCTTCCG GTTCGGGCAG
GTCCGCTCCG AGATCCGTGG TCCCGGGCTC GCCGTGATCA TGCCGGTCGC CGACCGCCTG
CAGAAGGTCA ACATGCAGAT CGTCACCATG CCGGTGCCCG CCCAGGACGG CATAACCCGT
GACAACGTGA CGGTTCACGT GGACGCCGTC ATCTACTTCC GGGTCGTCGA CCCGATGCGC
GTGGTCGTCG ACGTCCAGGA CTACGAGGCC GCCATCCGCC AGGTCGCGAT GGCCTCGCTG
CGCTCGATCA TCGGCAAGAG CGAGCTGGAC GACCTGCTGT CGAACCGGGA ACGGCTCAAC
CAGGGGCTGG AACTGATGAT CGACAGCCCG GCCGTGGGCT GGGGCGTGCA CATCGACCGC
GTCGAGATCA AGGACGTGGC ACTGCCGGAC TCGATGAAGC GGTCCATGTC GCGGCAGGCC
GAGGCGGAAC GCGAACGGCG CTCCCGCGTC ATCACCGCCG AGGGTGAGCT GCAGGCCTCG
CAGAAGCTGG CCCAGGCCGC CGAGACGATG GCCCTGCACC CCGCCGCGCT GCAGCTGCGC
CTGCTCCAGA CCGTCGTCGA AGTCGCCGCC GAGAAGAACT CCACCCTCGT GCTGCCCTTC
CCCGTCGAAC TGCTCCGCTT CCTGGAACGG GCGACACCCC CCGAGCCCCA GCCGCCCGCC
GGCCCGGCCG TCGCGAACGC CACCCCGGCC ACCGCGAACG CCACCCCGGC GCTCTCCGCC
GGTCTGCCTG CGCCGGCCGA CCAGTGCCTC CCGGACGCCG CCGTCCTGGA CCGGGCCGCA
CCCAACGGGG TGGGAGCCGA CCGGTAG
 
Protein sequence
MITVVTSALI AILTLGAMLL GTSVRIVKQF ERGVVFRFGQ VRSEIRGPGL AVIMPVADRL 
QKVNMQIVTM PVPAQDGITR DNVTVHVDAV IYFRVVDPMR VVVDVQDYEA AIRQVAMASL
RSIIGKSELD DLLSNRERLN QGLELMIDSP AVGWGVHIDR VEIKDVALPD SMKRSMSRQA
EAERERRSRV ITAEGELQAS QKLAQAAETM ALHPAALQLR LLQTVVEVAA EKNSTLVLPF
PVELLRFLER ATPPEPQPPA GPAVANATPA TANATPALSA GLPAPADQCL PDAAVLDRAA
PNGVGADR