Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_4118 |
Symbol | |
ID | 8667412 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | - |
Start bp | 4576878 |
End bp | 4577804 |
Gene Length | 927 bp |
Protein Length | 308 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | |
Product | Membrane protease subunits stomatin/prohibitin |
Protein accession | YP_003339767 |
Protein GI | 271965571 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.119159 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.0618424 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCACCG TCGTCACCTC CGCACTGATC GCGATCCTGA CACTGGGCGC GATGTTGCTC GGGACGAGTG TCCGGATCGT CAAGCAGTTC GAGCGGGGCG TCGTCTTCCG GTTCGGGCAG GTCCGCTCCG AGATCCGTGG TCCCGGGCTC GCCGTGATCA TGCCGGTCGC CGACCGCCTG CAGAAGGTCA ACATGCAGAT CGTCACCATG CCGGTGCCCG CCCAGGACGG CATAACCCGT GACAACGTGA CGGTTCACGT GGACGCCGTC ATCTACTTCC GGGTCGTCGA CCCGATGCGC GTGGTCGTCG ACGTCCAGGA CTACGAGGCC GCCATCCGCC AGGTCGCGAT GGCCTCGCTG CGCTCGATCA TCGGCAAGAG CGAGCTGGAC GACCTGCTGT CGAACCGGGA ACGGCTCAAC CAGGGGCTGG AACTGATGAT CGACAGCCCG GCCGTGGGCT GGGGCGTGCA CATCGACCGC GTCGAGATCA AGGACGTGGC ACTGCCGGAC TCGATGAAGC GGTCCATGTC GCGGCAGGCC GAGGCGGAAC GCGAACGGCG CTCCCGCGTC ATCACCGCCG AGGGTGAGCT GCAGGCCTCG CAGAAGCTGG CCCAGGCCGC CGAGACGATG GCCCTGCACC CCGCCGCGCT GCAGCTGCGC CTGCTCCAGA CCGTCGTCGA AGTCGCCGCC GAGAAGAACT CCACCCTCGT GCTGCCCTTC CCCGTCGAAC TGCTCCGCTT CCTGGAACGG GCGACACCCC CCGAGCCCCA GCCGCCCGCC GGCCCGGCCG TCGCGAACGC CACCCCGGCC ACCGCGAACG CCACCCCGGC GCTCTCCGCC GGTCTGCCTG CGCCGGCCGA CCAGTGCCTC CCGGACGCCG CCGTCCTGGA CCGGGCCGCA CCCAACGGGG TGGGAGCCGA CCGGTAG
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Protein sequence | MITVVTSALI AILTLGAMLL GTSVRIVKQF ERGVVFRFGQ VRSEIRGPGL AVIMPVADRL QKVNMQIVTM PVPAQDGITR DNVTVHVDAV IYFRVVDPMR VVVDVQDYEA AIRQVAMASL RSIIGKSELD DLLSNRERLN QGLELMIDSP AVGWGVHIDR VEIKDVALPD SMKRSMSRQA EAERERRSRV ITAEGELQAS QKLAQAAETM ALHPAALQLR LLQTVVEVAA EKNSTLVLPF PVELLRFLER ATPPEPQPPA GPAVANATPA TANATPALSA GLPAPADQCL PDAAVLDRAA PNGVGADR
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