| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_4114 |
|---|
| Symbol | |
|---|
| ID | 8667408 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | + |
|---|
| Start bp | 4571778 |
|---|
| End bp | 4572938 |
|---|
| Gene Length | 1161 bp |
|---|
| Protein Length | 386 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | |
|---|
| Product | Signal transduction histidine kinase-like protein |
|---|
| Protein accession | YP_003339764 |
|---|
| Protein GI | 271965568 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.0990468 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.0733806 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGCGGT GGGTGGCGGG GCCGCGGGCG TTCGACGCTG TGGCCGCGTT CGTGGTCGGG
ACGCCACTGT TCCTGCTCTC GGTCGTGGTG GCGGTGCTGT CGGTGCCGGG GGAGCGGGCG
GCGATCCTGG TGGCGGCCTG CCTGCTGGCG CACGTGGCGT TCGCCTTCCG CCGGGACCTG
CGCGCATTCT TCGTGATCGC CGTGGCGCTG GCCGTACAAG CGGTCGTGAC CGGGCTCTTC
ATCGTCTTGC CGACCGTCGT GCTCTTCCCG CTCGCCCTCT ACTCCTGCAC CGCGTACGGC
AGGTCGTACC TGCCCGTGGC CGTGGGACTG GCGGGGGCGG GACTGGCGGC GGCCAGGTTC
GCCACGGACT CCAGCGTCGC GGCCGCCCAT CTGGGACCGG ATCCGTGGAT GCTGCTGGGT
CTTCTGGCGG CCATTGTGGT GGCGGCCTGG GGGCTCGGCC TGTACCGCAG GACTCAGCTC
GCCTACGTCG ACCTCCTGAA GGAACAGGCC GCCGTGTCAG CCGCTCAGGC CACCCTGGCG
GAACGGGCCA GGATCGCCCG CGAGATGCAC GACGTAGTGG CCCACGCCCT GGCCGTCATC
GTCGCCCAGG CCAGAGGCGG GCGACTGATC CCCGACCGCG CCGCCGAGGT GCTGGCCACG
GTGGAGGAGA CCGGACGCCA AGCGCTCACC GAGATGCGCG GTCTGGTCGG CGTGCTCCGC
TCGGACACCG CCGTCAGCTC CGAGGCCGGC GATCTGCGGC CGCAACCGGG GCTGGCCGAG
CTCCCGGAAC TGCTGGACCG GACTCGCGCG GCCGGGCTCG CGGTGACCAT GACCACCTCC
GGCAGGGCGC GGCCGATCGG GCCGGGGGCG GAGCTGGCGC TCTACCGGGT GGTCCAGGAG
GCGTTGACCA ACACGCTCAA GCACGCGGGC GGCGGAGCGA GCTCGTCGGT CGGATTGTCG
TGGACGCCGG TGCACCTGGA AGTGACCGTG GCGGACGACG GCCGGGCTCC CACACCGACC
GCGGGCACGG TGCCGGGCAA CGGGCTGGCC GGGATGCGCG AGAGACTGCT GGCAGTCGGT
GGCACGCTCT CCGCCGGGGC CGCAGGGGAG CGGGGCTTCG TGGTGACGGC CCGCTTGCCG
TACCAGAAAG GCGCAGTGTG A
|
|---|
| Protein sequence | MTRWVAGPRA FDAVAAFVVG TPLFLLSVVV AVLSVPGERA AILVAACLLA HVAFAFRRDL
RAFFVIAVAL AVQAVVTGLF IVLPTVVLFP LALYSCTAYG RSYLPVAVGL AGAGLAAARF
ATDSSVAAAH LGPDPWMLLG LLAAIVVAAW GLGLYRRTQL AYVDLLKEQA AVSAAQATLA
ERARIAREMH DVVAHALAVI VAQARGGRLI PDRAAEVLAT VEETGRQALT EMRGLVGVLR
SDTAVSSEAG DLRPQPGLAE LPELLDRTRA AGLAVTMTTS GRARPIGPGA ELALYRVVQE
ALTNTLKHAG GGASSSVGLS WTPVHLEVTV ADDGRAPTPT AGTVPGNGLA GMRERLLAVG
GTLSAGAAGE RGFVVTARLP YQKGAV
|
|---|
| |