Gene Sros_4075 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_4075 
Symbol 
ID8667369 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp4536297 
End bp4536962 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content70% 
IMG OID 
ProductLysE family efflux protein 
Protein accessionYP_003339726 
Protein GI271965530 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTCGCTT CCCTCCTCGC CTTCACGGTC GTCGCACTGA TTCTCACCGT CTCTCCCGGC 
CCCGACACCG TGATCGTGCT GCGCACCACG GTCTCCTCGG GCCGCAGGGC CGGGTTCTTG
GCGGGGCTGG GGGTCAACCT CGGCTGCTAT GTCTGGGGAG TCGCCACCGC GCTCGGCCTG
ACCGCTCTGC TGGCCGCCTC CGATGTCGCC TACACCGCCG TGCGGATCGC CGGTGTCGCC
TATCTCGTCT GGCTCGGCGT CCGTGCGCTC TGGAACGCCC GCCGCGCCGT CCCGGCCGAA
GCCACCGAAG CCACCGAAGC CACCGGAGTC GCCGAGGCCG CGGGCGGCAC GGGCGGTCCT
CCTGTCAGGG CGCTGGCGAT CATGCGCACC GGATTCATCA CCAATCTGCT CAATCCCAAG
GTGGGGGTCA TCTACATGAC CCTGCTGCCG CAGTTCGTCC CCGCGGACGT CCCTGTGCTG
CCCGCGACCC TGCTCCTGGT CACCATCCAC AACCTGCTGG GCGCGGCGTG GTTCGCGCTT
GTGGTCCTCG CCGCGAGCCT CATGCGGCGC AGCCTGAGCC GGCCGGTCGT CCGCCGTCGC
ATGGAACAGC TGACCGGGCT CGTCTTCATC GGTTTCGGCG TCCGCCTGGC CGCCGAGTCC
GGCTGA
 
Protein sequence
MVASLLAFTV VALILTVSPG PDTVIVLRTT VSSGRRAGFL AGLGVNLGCY VWGVATALGL 
TALLAASDVA YTAVRIAGVA YLVWLGVRAL WNARRAVPAE ATEATEATGV AEAAGGTGGP
PVRALAIMRT GFITNLLNPK VGVIYMTLLP QFVPADVPVL PATLLLVTIH NLLGAAWFAL
VVLAASLMRR SLSRPVVRRR MEQLTGLVFI GFGVRLAAES G