Gene Sros_4071 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_4071 
Symbol 
ID8667365 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp4532420 
End bp4533001 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content70% 
IMG OID 
Productputative transcriptional regulator, TetR family 
Protein accessionYP_003339722 
Protein GI271965526 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0294777 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.94431 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGACCA AGCACGAGCT CGGCACCCGG GAGCGGATCA TCCGGGCGAC CTCCCGGCTG 
ATGCAGCGGC AGGGATACGA GGCGACCGGC CTCAAGGAGA TCTCCCGGGA GGCCGAGGCC
ACGCTCGGCT CGGTCTACCA CTTCTTCCCC GGCGGGAAGC GGGAGCTGGC GGTCGAAGCC
GTCCGCCACG GGGACCGGGA GTTCACCGAG CTCCTGCGCA CGGTGCTCGG CCGCATCGAC
GATCCGGCTG CGGCGATCAT CGTCTGCGCC CGCGACCTGT CCACGGGTCT GCGCGACTCC
GGCTGGCTCG ACGGCTGCCC CGTCACCACC ACGGCACTGG AGAGCGCGGG GCGCCTCCCC
GACATCCAGC GGGCCGCCGA GGAAGCCTTC GAGAACTGGC GCGGCCTGGT CCGCGACAAA
CTCCGCCGAT CCGGCTTCGA CGAGGACGTC GCGCACGATC TCGCCCACAC GGTGATCAAC
ACACTGGAGG GCGCGGAGAT GTCCGCGCAG GTCTCACAGA GTGAGGCACC ACTGGAGATC
GCCGGGCGGC ACCTCGCCCG GCTCATCGAC TCCTATCGGT GA
 
Protein sequence
MATKHELGTR ERIIRATSRL MQRQGYEATG LKEISREAEA TLGSVYHFFP GGKRELAVEA 
VRHGDREFTE LLRTVLGRID DPAAAIIVCA RDLSTGLRDS GWLDGCPVTT TALESAGRLP
DIQRAAEEAF ENWRGLVRDK LRRSGFDEDV AHDLAHTVIN TLEGAEMSAQ VSQSEAPLEI
AGRHLARLID SYR