Gene Sros_4054 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_4054 
Symbol 
ID8667348 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp4514030 
End bp4514896 
Gene Length867 bp 
Protein Length288 aa 
Translation table11 
GC content72% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003339705 
Protein GI271965509 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.023626 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCTGCA AGACTGTGAC CGCATTCACA GGGATCGTGG CGCTCGCGGC CACCTGTGCG 
GTCCCCTCGG CCGCGGCGGC CGCCGAGCAG TGGCGCCCGG TGGTGATGGC CGCGGTCGGA
GACTCGATCA GTGCCGGGTT CAACGCCTGC GGCTGGTACG TCCCCTGCGT CTCGCGCTCC
TGGTCCTCGG GTGACAGCCG GAGCGTCCGG AGCCACTACA CGAGGCTGCG CGACCTGGAC
GACGGCATCG CCGGGCACAA CATCACCCTC GCCGTCCCCG GCGCGACCAG CGCCGACCTC
GCCGGGCAGA TGGCCAGGGC CGTCGCGCAG CGCGCCGACT ACGTGACGGT CCTGGTCGGG
GCCCAGGACG CGTGCATGTC CGAGGAGCGG CGGATGACCC CGGTGGCGCT CTACCAGAGC
CGGGTGACCG AGGCGTTGAG GGTGTTACGG GCCGGCCGGC CCGGCGCCAG GGTGTTCGTG
GCGAGCATCC CCGACCTCAA GCGGCTGTGG CGGGTCGGCA GGGACAGCGT GGTGGCGCGC
GGCTTCTGGG CGATCGGCCG GATCTGCCCG ACCATGCTGG CCAAGCCCAC CTCGACCGCC
GCTGCCGACC GGGCCCGCCG CGACCGGGTG CGCGGCAGGG TCACCGCCTA CAACGCCGTC
CTGGCCAGGG CCTGCGCCGC GTACGGCCCG GCCTGCAGGT TCGACGGCAA CGCCCTGTTC
AACACGCCCT TCACGCTGAG CCACGTCAGC AAATGGGACT TCTTCCACCC CAACGCCGCG
GGCCAGGAGC TGATCGCCGA GAAGACCTTC CAGGCGATCA GCGACTGGGC CGAGGAGCCC
GTCTGGGAGC TGGAGGCCCG GTCCTGA
 
Protein sequence
MACKTVTAFT GIVALAATCA VPSAAAAAEQ WRPVVMAAVG DSISAGFNAC GWYVPCVSRS 
WSSGDSRSVR SHYTRLRDLD DGIAGHNITL AVPGATSADL AGQMARAVAQ RADYVTVLVG
AQDACMSEER RMTPVALYQS RVTEALRVLR AGRPGARVFV ASIPDLKRLW RVGRDSVVAR
GFWAIGRICP TMLAKPTSTA AADRARRDRV RGRVTAYNAV LARACAAYGP ACRFDGNALF
NTPFTLSHVS KWDFFHPNAA GQELIAEKTF QAISDWAEEP VWELEARS