Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_4046 |
Symbol | |
ID | 8667340 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | - |
Start bp | 4503684 |
End bp | 4505363 |
Gene Length | 1680 bp |
Protein Length | 559 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | |
Product | 5-oxoprolinase (ATP-hydrolyzing) |
Protein accession | YP_003339697 |
Protein GI | 271965501 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0146598 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.00136288 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | GTGATCGACC CGGTGACCAC GGAGATCATC CGATGCGCGC TGCTGCAGGC GGCCGAGGAC ATGAACACCA CGCTGATCAG GTCCTCCTAC ACTCCGGTGA TCTACGAGGC GAAGGACTGC GCGGTCGCCC TGCTCGACCG CGACCACAAC GTGCTCGGCC AGTCCTCCGG CCTGCCGATC TTCCTGGGCA ACCTGGAGGT CTGCACCCGC GAGACCGAGC GCCTGCACGG CCGCCAGGTG TGGCGGGAGG GCGACGTGTG GGTGCTCAAC GACTCCTACA TCGGCGGCAC CCACCTCAAC GACGTCACCG TCTACGGGCC GATCTTCGTC GACGGCGAGC TGGCCGGCTT CGCCGCGTCC CGCGCGCACT GGCTGGACAT GGGGTCCAAG GACCCGGGCG GGTCGATGGA CTCCACCTCG ATCTTCCAGG AGGGGCTGCG CCTGGGCCCG GTCAGGATCT ACGAGGGCGG CGAGCCCCGC GCGGACCTGC ACGAGGTGAT CGCCCGCAAC GTGCGGTTCC CCCACGCCAC CCTCGGCGAC ATGCGGGCCC AGGTGGCCTG CGTGACGACC GGGCGGCGCC GCCTGGCCGA GATCGTCTCC CGCTGGGGCC TCGACACGGT GACGGCCGCC AGGGACGAGA TCTTCGCGCA GACCGAGCAG CTGGAGCGGG CCGCGATCGC CGCCGTCCCC GACGGGGTCT ACCGGGCCGG GGGGTTCCTG GACAACGACG GCATCGACCT GGCCACCCCG CTGCCGGTGA ACGTGACCGT GACCGTGGCC GGCGAGAGCG TCACGGTGGA CCTCACCGAC TGCGCCGACC AGGCCACCGG GCCGGTCAAC TGCGGCGCCG CCCAGGCCGT GGCCGCCGTC CGGGTCGCCT ACAAGCTCCT GGTCAGCGGT GAGGTGCCGC TCAACGGAGG GTCCTTCCGG CCGCTCTCGG TGGCGACCCG GCCCGGTTCG ATGCTCGCCG CCGAGGCGCC CGCCGCCTGC CAGTACTACT ACTCCCATCT GGGACTGGTC ATCGACCTGG TGGTCAGGGC CCTCGCCCCG GCGCTGCCCG GCAAGGCCGC GGCGGCCAGC TACGGCGACT CCCTCATCGT CCAGATGTCC GGGGTGGACC CGCGCACCGG CAAGCTGTAC GTCTCCCAGG AGGCGACCGT CGGCGGCTGG GGGGCCTGGG ACGGCGGCGA CGGCGAGACC TGCCTGATCA ACAGCGTCAA CGGCTCCCTG CGCGACATGC CGATCGAGGT GCTGGAGACC CTCTTCCCGG TCCGCGTGAC CCGCTACGAG ATCCGGCCCG GCACCGGCGG CGCCGGGCGG TGGCGTGGCG GCAACGGTGT CGTGCGGGAG TACGAGTTCA GCGGGGACAC CTCGCTGTCG CTGTGGTTCG AGCGCTCGGT CACGCCCGCC TGGGGCCTGG CCGGGGGCGG CGCCGGGGCC CCGCCCCGGG TGACCCTCAA CCCGGGCAGG CCGGGCGAGC GCGAGATGCT CAAGGTCAAC GCCCTCGCGG TCCGCAAGGG GGACGTGCTG CGCTGCGAGT CCGGCGGCGG CGGCGGGTAC GGTCCCGCGG AGCTCCGGGA CGCTCCGGCC CTCGCCCGCG ACCTCGCCGA GGGCATGGTC ACGCCGCCGG GTCGCGCTCA GGTCGGCCCG GCCGCCGCGC CCGTCCCGCC GGTGAGGTAG
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Protein sequence | MIDPVTTEII RCALLQAAED MNTTLIRSSY TPVIYEAKDC AVALLDRDHN VLGQSSGLPI FLGNLEVCTR ETERLHGRQV WREGDVWVLN DSYIGGTHLN DVTVYGPIFV DGELAGFAAS RAHWLDMGSK DPGGSMDSTS IFQEGLRLGP VRIYEGGEPR ADLHEVIARN VRFPHATLGD MRAQVACVTT GRRRLAEIVS RWGLDTVTAA RDEIFAQTEQ LERAAIAAVP DGVYRAGGFL DNDGIDLATP LPVNVTVTVA GESVTVDLTD CADQATGPVN CGAAQAVAAV RVAYKLLVSG EVPLNGGSFR PLSVATRPGS MLAAEAPAAC QYYYSHLGLV IDLVVRALAP ALPGKAAAAS YGDSLIVQMS GVDPRTGKLY VSQEATVGGW GAWDGGDGET CLINSVNGSL RDMPIEVLET LFPVRVTRYE IRPGTGGAGR WRGGNGVVRE YEFSGDTSLS LWFERSVTPA WGLAGGGAGA PPRVTLNPGR PGEREMLKVN ALAVRKGDVL RCESGGGGGY GPAELRDAPA LARDLAEGMV TPPGRAQVGP AAAPVPPVR
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