Gene Sros_4045 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_4045 
Symbol 
ID8667339 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp4502735 
End bp4503481 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content72% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003339696 
Protein GI271965500 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00508612 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.00102344 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
GTGCCGCGCG AATTCGAGAT CCATCGGGAG GCCGAGCTCG GCACGGCCCC GGAGCAGGTG 
TGGGAGGCGA TCGCCACCGG CCCGGGGGTC GACTCCTGGT TCGTGGGGCG CAGCCATGTC
GAGCCCGCCG AGGGCGGCGC GGTCCGCACG GACATGGGGA ACGGCCATGT CCAGGAGTCC
GTCGTGACCG CGTGGAACCC GCTGAAGCAG TTCGCCTACC GCAGCGACGG CGAGAACGGG
AGATTCGTCG CGTTCGAATA CCTCATCGAG GGACGCGGCA GGGGCAGCAC CGTCCTGCGG
ACCGTGGCCA GCGGTTTCCT GCCCGGCGAC GACTGGGAGG CGGAGTACGA CGCCATGACC
AAGGGCGGGG AGATGTACTT CCGCACGCTG GTCGAGCGCC TCACGCACTT CCCCGGCCGG
GCCGCGTCGT CCTTCACCGT GTTCGGACCG CCGGTGGCCG GCTGGGAGCG GACGCGGGCG
GCGCTCGTCG GCGCGCTCGG GCTGAGCGAC CCGGTCACCG AAGGCGACCG GGTCCGCTTC
ACCCCGGACG GGCTCGCGCC GGTCGAGGGC GTCGTGTACG CCGTCAACCC CGACACCCTG
GGCGTGCGCA CGGGCGACGC GATGTACCGG TTCCTGCGCG CCTTCCGGGG CGGGCTGATG
ATCGGCCACC ACATCTTCTC CGACGGGGCG GACATCGAGG AGACCGAGCG GGCCTGGCGG
GCCTGGCTCA CCCGGCTGCC CGTCTGA
 
Protein sequence
MPREFEIHRE AELGTAPEQV WEAIATGPGV DSWFVGRSHV EPAEGGAVRT DMGNGHVQES 
VVTAWNPLKQ FAYRSDGENG RFVAFEYLIE GRGRGSTVLR TVASGFLPGD DWEAEYDAMT
KGGEMYFRTL VERLTHFPGR AASSFTVFGP PVAGWERTRA ALVGALGLSD PVTEGDRVRF
TPDGLAPVEG VVYAVNPDTL GVRTGDAMYR FLRAFRGGLM IGHHIFSDGA DIEETERAWR
AWLTRLPV