Gene Sros_4042 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_4042 
Symbol 
ID8667336 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp4499877 
End bp4500911 
Gene Length1035 bp 
Protein Length344 aa 
Translation table11 
GC content76% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003339693 
Protein GI271965497 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.277323 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.00123714 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
GTGATCGGCC CCGATTCGCT CGGCGCCTTC GCCGCCGGGT CGCGGCTGTT CGCCACCGGC 
GCGGCCGACT CGTCCTTCCA GGTCGCGCTC GACTGGGCCG GATCGGTGCT CGGCGCCGGG
GTGCCGGTGG TCGGCGCGGA CGCGCTGCCG CCGGAGACGC TCTCCGTCGC GATCAGCCTC
TACGGTTCCA CCACGGCCCT CGGTGAGCAG CTGCCCGGCG GGGACGAGCC CCGGCGGGTG
GTCCACGCGC TGGAGCGGCG GCTCGGCCGG AAGGCGGGCG CGGTCGTGGC GCTCAACCTC
GCCGCGGAGA ACGCGCTGCT CCCGGTGATC ACCGCGGCGC TGCTGGACGT GCCGCTGGTG
GACGGCGACG GCACCGGGCG GGTGTTCCCG CTGATCGAGC AGACCACCTT CACGCTGGGC
GGGGTCGCCG CCACGCCGCT CGAACTCGCC GGTCCCACCG GGGACCTGGT GGGGCTGGAC
ACCGAGCCCG ACCGGGTGGA GGAGCTGGCG CGCCCCCTGG TCCTGGCCCT GGGCGGCTGG
GCGCTGGCCG CCTGCTACCC GATGCCCGCC GGGGTCCTGT CGCGTGTCCT GGTCCCCGGC
ACGGTCAGCC GCCTGCTGGC GGCCGGCGTC CCGGGAGCGC CGCGCTCCCT GGCCGCGCCG
TACGGCGTGC GGACCCTGTG CCGGGGCCGG ATCACCGAGG TGGGGGGCAG CACCGGGTAC
GTCAGGGACC TGTCGGCGCC GCCGCTGCCG TCGCTGCCGT CCAGCATCGT GGTCCAGGAG
AGCGAGGGGC TGGGCAGGCT GGTCCGGCTG GAGGCGCACA ACGAGATCGT TCTGGCGCTG
GCCGACGGCG CGGTGGCGGC CATGGCGCCC GACCAGATCT GCATGATCTC GGCACTGGAC
GGGGTGGTGG TGGACGTCGA CAAGGCGTAT CCGGGTCTGG AGGTGGAGGT CATGGTGGTG
AGGGCCGCGC CCGCGTGGCA CACCGGGCGG GGCAGGGCGC TGGGCGGGCT GAGGGCGTTC
GGGGTGCCGT TGTGA
 
Protein sequence
MIGPDSLGAF AAGSRLFATG AADSSFQVAL DWAGSVLGAG VPVVGADALP PETLSVAISL 
YGSTTALGEQ LPGGDEPRRV VHALERRLGR KAGAVVALNL AAENALLPVI TAALLDVPLV
DGDGTGRVFP LIEQTTFTLG GVAATPLELA GPTGDLVGLD TEPDRVEELA RPLVLALGGW
ALAACYPMPA GVLSRVLVPG TVSRLLAAGV PGAPRSLAAP YGVRTLCRGR ITEVGGSTGY
VRDLSAPPLP SLPSSIVVQE SEGLGRLVRL EAHNEIVLAL ADGAVAAMAP DQICMISALD
GVVVDVDKAY PGLEVEVMVV RAAPAWHTGR GRALGGLRAF GVPL