Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_4016 |
Symbol | |
ID | 8667310 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | - |
Start bp | 4469674 |
End bp | 4471032 |
Gene Length | 1359 bp |
Protein Length | 452 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | |
Product | DNA-directed RNA polymerase sigma subunit (sigma70/sigma32)-like protein |
Protein accession | YP_003339667 |
Protein GI | 271965471 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0626871 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.0433462 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCCAAA CCGCCGTGGC GACCTCACCT GAGGCCCCGA CGACCCTCGA ACAGCTCCTT GACCGAGGGC GAGTCCAGGG CCACCTTTCA CTCGCGGAGC TGCGTCACGC CTTCGCCGAG GCAGGGATCA GCCCGACCGA GGGCAGGTCG ATCCTGCGGG AGCTCACCGA GGCGGGCGTC AGCCTTGCCG CCGAGAACGA GCCCGCGCTC GCGGCCGGGG CGAAGAAGCC CGCGGCCAAG AGCACCGCCC GCAAGACGAC CACCCGCAAG ACGAAGGCCG CGTCCGACAA GACGGCCGCC CCCGAGAACA ACAAGTCGAC GGTCCGGGCC GAGCCCGCGG CCAAGGACCG CAAGGACGCC GGCCCCGAGG CGGGCGACGA GGAGTGGACC GCCCCCGAGG AGGCCGAGCT GGAGGCCGAG CCGACCCTGG ACCTGGACGA CCAGTCCTCG GTCATGGGCG ACTCGGTGCA CACCTACCTC AAGTCGATCG GCCGCCGCAC GCTGCTGACC GCCGCCCAGG AGGTCGAGCT CGCCAAGCGG ATCGAGGCCG GCCTGTACGC CGAGTCCAAG CTGGAGGCCG AGCCGGGTCT GTCGGCCGCC GCACGCGACG ACCTGGAGTG GGTGGCCGAG GACGGCCGCC GCGCCAAGGA CCACATGCTG GAGGCCAACC TCCGGCTGGT CGTGTCGGTG GCCAAGAAGT ACACCGACCG CGGCATGGCC CTGCTCGACG TGGTCCAGGA GGGCAACCTC GGCCTGATCC GCGCGGTGGA GAAGTTCGAC TACACCAAGG GGTACAAGTT CTCCACCTAC GCCATGTGGT GGATCCGCCA GGCCATCCAG CGCGGCTTCG CCGACTCCGC CCGCACCATC CGGCTGCCGG TCCACGTGCT GGAGATGCTC TCCAAGCTGT CGCGCGTCGA GCGTGACATG CACCAGCGTC TCGGGCGCGA GCCCACGCCG GAGGAGCTGG CGGTCGAGCT GGACAAGACC CCCGACCAGA TCGAGGAGCT GCTCCGCACC AGCCGCCAGC CGATCAGCCT CAACGCCACC ATCGGCGAGG ACGGCGAGAC CACCATCGGC GACCTCATCG AGGACGTCGA CTCCCCCGAG GCGTCCGAGG TGGTGGACCG CCAGCTCCTC GGCGAGCAGC TACGGGGCGT GCTCGGCAAC CTCTCCCCCC GGGAGGCCAA GATCATGGCC CTGCGCTTCG GCCTCGTCGA CGGCAAGCCC CACACCCTCG ACGAGATCGG CAAGCACCTC GGCCTGACGC GCGAGCGCAT CCGCCAGCTC GAGAAGGAGT CCCTCTCCAA GCTGCGCCAC CCCAGCAACA CCCGTCCGCT GCTCGACTGG GCGAGCTGA
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Protein sequence | MPQTAVATSP EAPTTLEQLL DRGRVQGHLS LAELRHAFAE AGISPTEGRS ILRELTEAGV SLAAENEPAL AAGAKKPAAK STARKTTTRK TKAASDKTAA PENNKSTVRA EPAAKDRKDA GPEAGDEEWT APEEAELEAE PTLDLDDQSS VMGDSVHTYL KSIGRRTLLT AAQEVELAKR IEAGLYAESK LEAEPGLSAA ARDDLEWVAE DGRRAKDHML EANLRLVVSV AKKYTDRGMA LLDVVQEGNL GLIRAVEKFD YTKGYKFSTY AMWWIRQAIQ RGFADSARTI RLPVHVLEML SKLSRVERDM HQRLGREPTP EELAVELDKT PDQIEELLRT SRQPISLNAT IGEDGETTIG DLIEDVDSPE ASEVVDRQLL GEQLRGVLGN LSPREAKIMA LRFGLVDGKP HTLDEIGKHL GLTRERIRQL EKESLSKLRH PSNTRPLLDW AS
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