Gene Sros_4016 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_4016 
Symbol 
ID8667310 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp4469674 
End bp4471032 
Gene Length1359 bp 
Protein Length452 aa 
Translation table11 
GC content71% 
IMG OID 
ProductDNA-directed RNA polymerase sigma subunit (sigma70/sigma32)-like protein 
Protein accessionYP_003339667 
Protein GI271965471 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0626871 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.0433462 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCCAAA CCGCCGTGGC GACCTCACCT GAGGCCCCGA CGACCCTCGA ACAGCTCCTT 
GACCGAGGGC GAGTCCAGGG CCACCTTTCA CTCGCGGAGC TGCGTCACGC CTTCGCCGAG
GCAGGGATCA GCCCGACCGA GGGCAGGTCG ATCCTGCGGG AGCTCACCGA GGCGGGCGTC
AGCCTTGCCG CCGAGAACGA GCCCGCGCTC GCGGCCGGGG CGAAGAAGCC CGCGGCCAAG
AGCACCGCCC GCAAGACGAC CACCCGCAAG ACGAAGGCCG CGTCCGACAA GACGGCCGCC
CCCGAGAACA ACAAGTCGAC GGTCCGGGCC GAGCCCGCGG CCAAGGACCG CAAGGACGCC
GGCCCCGAGG CGGGCGACGA GGAGTGGACC GCCCCCGAGG AGGCCGAGCT GGAGGCCGAG
CCGACCCTGG ACCTGGACGA CCAGTCCTCG GTCATGGGCG ACTCGGTGCA CACCTACCTC
AAGTCGATCG GCCGCCGCAC GCTGCTGACC GCCGCCCAGG AGGTCGAGCT CGCCAAGCGG
ATCGAGGCCG GCCTGTACGC CGAGTCCAAG CTGGAGGCCG AGCCGGGTCT GTCGGCCGCC
GCACGCGACG ACCTGGAGTG GGTGGCCGAG GACGGCCGCC GCGCCAAGGA CCACATGCTG
GAGGCCAACC TCCGGCTGGT CGTGTCGGTG GCCAAGAAGT ACACCGACCG CGGCATGGCC
CTGCTCGACG TGGTCCAGGA GGGCAACCTC GGCCTGATCC GCGCGGTGGA GAAGTTCGAC
TACACCAAGG GGTACAAGTT CTCCACCTAC GCCATGTGGT GGATCCGCCA GGCCATCCAG
CGCGGCTTCG CCGACTCCGC CCGCACCATC CGGCTGCCGG TCCACGTGCT GGAGATGCTC
TCCAAGCTGT CGCGCGTCGA GCGTGACATG CACCAGCGTC TCGGGCGCGA GCCCACGCCG
GAGGAGCTGG CGGTCGAGCT GGACAAGACC CCCGACCAGA TCGAGGAGCT GCTCCGCACC
AGCCGCCAGC CGATCAGCCT CAACGCCACC ATCGGCGAGG ACGGCGAGAC CACCATCGGC
GACCTCATCG AGGACGTCGA CTCCCCCGAG GCGTCCGAGG TGGTGGACCG CCAGCTCCTC
GGCGAGCAGC TACGGGGCGT GCTCGGCAAC CTCTCCCCCC GGGAGGCCAA GATCATGGCC
CTGCGCTTCG GCCTCGTCGA CGGCAAGCCC CACACCCTCG ACGAGATCGG CAAGCACCTC
GGCCTGACGC GCGAGCGCAT CCGCCAGCTC GAGAAGGAGT CCCTCTCCAA GCTGCGCCAC
CCCAGCAACA CCCGTCCGCT GCTCGACTGG GCGAGCTGA
 
Protein sequence
MPQTAVATSP EAPTTLEQLL DRGRVQGHLS LAELRHAFAE AGISPTEGRS ILRELTEAGV 
SLAAENEPAL AAGAKKPAAK STARKTTTRK TKAASDKTAA PENNKSTVRA EPAAKDRKDA
GPEAGDEEWT APEEAELEAE PTLDLDDQSS VMGDSVHTYL KSIGRRTLLT AAQEVELAKR
IEAGLYAESK LEAEPGLSAA ARDDLEWVAE DGRRAKDHML EANLRLVVSV AKKYTDRGMA
LLDVVQEGNL GLIRAVEKFD YTKGYKFSTY AMWWIRQAIQ RGFADSARTI RLPVHVLEML
SKLSRVERDM HQRLGREPTP EELAVELDKT PDQIEELLRT SRQPISLNAT IGEDGETTIG
DLIEDVDSPE ASEVVDRQLL GEQLRGVLGN LSPREAKIMA LRFGLVDGKP HTLDEIGKHL
GLTRERIRQL EKESLSKLRH PSNTRPLLDW AS