Gene Sros_3986 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_3986 
Symbol 
ID8667280 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp4442036 
End bp4443145 
Gene Length1110 bp 
Protein Length369 aa 
Translation table11 
GC content67% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003339638 
Protein GI271965442 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.82683 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAAGTC CCGAAGAGCT GAACACCGCC CTGGAGAACG TCCACCGCGC CGGAATGCCC 
GGCCTGTTCG CCGAGGTGCG TGACGGCGAC GAGGTCTGGC GCGGTGCCGC CGGGGTCGCC
GACGTCGCCA CCGGCCGCCC TGTCTCCGCC GACATGCGGC ACCGCGTCGG CAGCATCACC
AAGTCATTCA CCGTCGCCGC GGTGATGCAG CTGGTCGAAG GTGGTCAGAT TGGTCTCGAC
GCGCCGATCG GCCGCTACCT GCCGAAGCTG GTTCCCGGAG AACGCGGCGA TGCGATCACG
GTCCGGATGT TGATCAACCA CACCAGTGGT CTTGCCGAAT ACCTCCCGTA CGTCTACCCC
TCCCTCAAGG CCTTCCCGGT CGTGGCTGAC ACGAGGCCGC AGAGCCTGGA CGACCACCGG
CTCACCCGGT TTCACGCCGT AGAGCTGATC GAGAAGGGCG TCTCCGCACC CGCTTTCAGC
GCGCCAGGCG GCACTCCGGG GTTGTACTCC AACACCAACT ACCTGCTGCT CGGCCAGCTT
CTGGAGCAGG TAACCGGTAC GAAGGCCGAG ACGTACATCA CCCAGAACGT CATCGAGCGC
GCTGGGCTGC GGGACACCGA GCTTCCCGAT GGATCGCGGT TCAGCGGGCC GCAGTCGCAG
ATCTACGAGG CGTGGTTCGG CATGATCGAG CCGCCGCGCG ACTTCAGCGT CTTCGACATG
TCCTTTGCGG GGCTGGCGGG TTCGCTGATC TCGACCGTCG CGGATCTCAA CCGGTTCTTC
GGCTTGCTGT TCGCCGGTGA GATCGTCAGC CCGTCGTCGC TGGCGGAGAT GCGGCGCACC
GTCCGCGTCA TCTCCCAGGA GAGCAAGATC ATCGACTACG GGCTGGGCCT GTACCCGATG
GAGATGCCCG GCGGCGGCAC CTTCTGGGGG CATGGCGGCA CCGTCTGGGG TGCCGGAGCA
CTGGCCATGA CCAGCGCCGA CGGCAAGCGG CAGATGTCCG TCGCGGTGAA CATGCAGAGG
TGGAACAGGC TCGACTCCAC GGGCAGGCCG CAGCCCCATC CCATCGACGA GGCGCTCGCG
GCTCTGTACG GCATGGCGAT GTACGGCTGA
 
Protein sequence
MRSPEELNTA LENVHRAGMP GLFAEVRDGD EVWRGAAGVA DVATGRPVSA DMRHRVGSIT 
KSFTVAAVMQ LVEGGQIGLD APIGRYLPKL VPGERGDAIT VRMLINHTSG LAEYLPYVYP
SLKAFPVVAD TRPQSLDDHR LTRFHAVELI EKGVSAPAFS APGGTPGLYS NTNYLLLGQL
LEQVTGTKAE TYITQNVIER AGLRDTELPD GSRFSGPQSQ IYEAWFGMIE PPRDFSVFDM
SFAGLAGSLI STVADLNRFF GLLFAGEIVS PSSLAEMRRT VRVISQESKI IDYGLGLYPM
EMPGGGTFWG HGGTVWGAGA LAMTSADGKR QMSVAVNMQR WNRLDSTGRP QPHPIDEALA
ALYGMAMYG