Gene Sros_3985 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_3985 
Symbol 
ID8667279 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp4441273 
End bp4441959 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content68% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003339637 
Protein GI271965441 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.997476 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGATCT CCGACGAGAG GGATGAGATG GCAGGTAGAA GGCGCTGGTC GACCGGAGAG 
ATCCTGGATG CGGCGGCGGA GCTGCTGCGC ACGGGCGACG CCGATTCGTT CAGCGTGCGC
AAGCTCGCGG CAGTGCTCGG CACCGATTCC TCCAGCCTTT ACCGGCACTT TCGCAGCAAG
ACCGAGCTGC TGCGCGCGGT CGCCGACCGG ATCCTCCTGG CCGCCATGGA CGGCTACCGG
CCCGAGGGTG ACTGGAAGCA GCGCATCATG ACCCTGGCCC TGCGCGTGAG AGAGGCCTTC
GGCCGGCATC CCCAGCTCGC TGCGGTCTGG GGACGCTACG CCTCAGGCGG CACCGGTTCC
CGTCTGATCA TGGAAGAGGT GCTGCAGGCG CTGCGCGCCT CGGGACTGCC CGACGAGGAG
ATCCCTGTGC GCTACCACCG GATCGCTGTC CTCATCGCCG CGTTGATCGC CTCCGAGGCC
GGGGTCAGCA CCATCACTCC CGAAGAGCAC GAACAGGGCA TGGAGCTGTT CCGCGTCGCG
GTACTCGGCG CCGACCCCGA ACGCTTCCCA GCTCTGGCCC ACTTCGCCCG CGACGTCCGC
CCTCTCGGGG TGGACCGCCG CGCCGCGTTC GAAGAAATCC TCGCCGTCCA ACTCGCCCAC
ATCGAGGCCG CAACCTGCCT GAGCTAG
 
Protein sequence
MLISDERDEM AGRRRWSTGE ILDAAAELLR TGDADSFSVR KLAAVLGTDS SSLYRHFRSK 
TELLRAVADR ILLAAMDGYR PEGDWKQRIM TLALRVREAF GRHPQLAAVW GRYASGGTGS
RLIMEEVLQA LRASGLPDEE IPVRYHRIAV LIAALIASEA GVSTITPEEH EQGMELFRVA
VLGADPERFP ALAHFARDVR PLGVDRRAAF EEILAVQLAH IEAATCLS