Gene Sros_3968 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_3968 
Symbol 
ID8667262 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp4422770 
End bp4423768 
Gene Length999 bp 
Protein Length332 aa 
Translation table11 
GC content75% 
IMG OID 
Productaminoglycoside phosphotransferase 
Protein accessionYP_003339621 
Protein GI271965425 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.574254 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.432727 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGACG ACCTCGTCTC CGGCGTCTTC GGCCCCGGTA CGGCTGTCGC GTCCCGGATC 
CGGCTGCCGG GGGGCGCCTC ACGGGAGACG TGGGCGCTGG ACGTGGTGGA TCCGGGCGGC
GTGACCCACG AGCTGATCCT TCGGCTGGAC TCCCCCGGCG CCGCGCTGGA CGCCGGGATC
GGGCTGGCCG GCGAGGCCGC GCTGATGCGG GCGGCCCGCG CGGCCGGCGT GCCGGTGCCC
GGGGTCCTGG CCGCCGCCGG CTCGCACATC CTGATGGAGC GGGTGAGCGG CGAGACGATC
CCCAGGAGGA TCCTCCGCGA TGACGCCTTC GCGGAGGTGC GCCCCGGGCT GGCCGCGCGG
TGCGGGGAGA TCCTGGCCGC GATCCACCGC ATGCCGCTGT CGTCGCCGGC GCCGGCCGCG
CCCCGGGACG ACGCGGCACG GGCCATGCCC CCGCAGGCGG CGCCGCCCGT CGTACCCGAC
GATCCGCTCC GGTCGTGGCG GGATCTGCTC GATCTCACCG GGCAGCCGCA CCCGGTGTTC
GAGCTGGCCT TCCGGCGGCT GGCGGACTCC CGTCCGGCGG GCGGCCGGGT GACGGTCGTG
CACGGCGACT TCCGCAACGG CAACCTCGTC GTCGGCCCCG ACGGGATCCG CGCGGTGCTC
GACTGGGAGC TGGCCCACGC CGGTGACCCG CTGGAGGACC TCGGATGGCT CTGCGTGAAG
TCCTGGCGGT TCGGCTCGCC GCTGCCGGTG GGCGGCTTCG GGGAGTACGA CCTGCTCGTC
GAGGCCTACG AACGGGCGAG CGGCCATCCG GTGGATCGCG GGGCACTGCG CTGGTGGGAG
ACGTTCGGCG TGCTCAAGTG GGGGGTCATC TGCGTCATGC AGACCATGCG CCACCTCACC
GGCGGTGCCC GCTCCGTCGA GCTGGCCGCG ATCGGCCGCC GGGTCTGCGA GACCGAGTGG
GACCTTCTGG AGGCCCTGGC CCGGGAGGCC CCTGGCTAA
 
Protein sequence
MIDDLVSGVF GPGTAVASRI RLPGGASRET WALDVVDPGG VTHELILRLD SPGAALDAGI 
GLAGEAALMR AARAAGVPVP GVLAAAGSHI LMERVSGETI PRRILRDDAF AEVRPGLAAR
CGEILAAIHR MPLSSPAPAA PRDDAARAMP PQAAPPVVPD DPLRSWRDLL DLTGQPHPVF
ELAFRRLADS RPAGGRVTVV HGDFRNGNLV VGPDGIRAVL DWELAHAGDP LEDLGWLCVK
SWRFGSPLPV GGFGEYDLLV EAYERASGHP VDRGALRWWE TFGVLKWGVI CVMQTMRHLT
GGARSVELAA IGRRVCETEW DLLEALAREA PG