Gene Sros_3955 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_3955 
Symbol 
ID8667245 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp4402328 
End bp4404478 
Gene Length2151 bp 
Protein Length716 aa 
Translation table11 
GC content77% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003339608 
Protein GI271965412 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.148683 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0140585 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTCGACG GAGCCACATC CCCATCGCCG GCCGTCACGG TGATCGAACC CCCCGCCCCC 
GCCCCCGCCC ACCGTCTCCA GCCGCTGCTG CACGATCTCG TCAGCGCCGT CATGGCGCCG
ACGACCGCGC TGAGCGGCGG CGACGGGCAG ATCCGGCCGG CCGGCGTCCA GGGCCTGTTC
CACGCCGACT CCCGTGCGCT GTCACAGGTC AGGCTGGAGA TCGACGGCCG GGAGCCCGAG
GCCGTCGGCT ACGCGCCGCA CGGGGCGGGC GGCGCCCGGT TCGTCGCGCT GGCGCGATGG
CTGGGGGACC CCTCCCCCGA CCCCACCGTC CGGATCCACC GCGTCCGGCA GGTCGTGCCG
GGCGGAATGA GCGAGCGCAT CGAGATCGTC TCCACCGCCT CCAGGCCTGT CACCGCTACC
ATCACCCTAG CCCTGAGCTG CGACTTCGCC CCGATAGAGG TGGTGAAGTC GGGGGGTGAG
ACCACACCGG CCGCCGTCGC GGGCGGCGGG CCCGGCGAGC TGACGTGGGG TTCGGGCGGC
ATCCGGGTCA CGGTGGCCGG CGTGGACGCG CACGCCGAGC CGGCGGAGGC CGGACGGGCG
GGGCGGCTGT GCTGGCCCGT CACGCTGGCA CCCCGCGGCC GGACCACGCT CCGCTGGGAC
GTCGCGGTGC GCGACCCGGA GGCCGTGGTG ATCGCCCCCG CCCGCCCCGC CGAGTGGGTC
ACCGAACGGG GCGGGCCCCG GATCACCGCC ACCGACCGCC GGCTGACCCG GCTCTTCGAG
CAGTCCCTGG ACGACCTGCG GTCGCTGCGG CTGGCCGAGA CGGGCGCCCC CGCCGACGCC
TTCCTCGGCG CCGGCGTGCC CTGGTTCCTC ACGCTCTTCG GGCGCGACAG CATCTGGGCC
GCCCGGATGC TGCTGCCGCT CGGCACCGAG CTGGCCATGG GCACCCTGCG GGTGCTGGCC
CGGCGGCAGG GCACCCGGCT CGACCCCGGC TCCGGCGAGG CACCCGGGAA GATCATGCAT
GAGCTGCGGC GGCACGAGTT CGCCCTGGAG GGCGACAACC TGCGCCTGCC GGCCGCCTAC
TACGGCACGG TCGACGCCAC CCCGCTCTGG ATCAGCCTGC TGCACGACGC CTGGCGCTGG
GGCGCGCCCG AGGCGGAGGT GGCCGCGCTC CTGCCCCATC TGGAGGCCGC CCTCGGCTGG
CTCGCCGAGC ACGCCGATCC CGACGGCGAC GGCTTCGTGG AGTACGTCGA CACCAGCGGC
CGGGGACTGG CCAACCAGGG CTGGAAGGAC TCCGGCGACG CGGTGCGCTT CCACGACGGC
CGCCAGGCCG AGCCGCCGAT CGCCCTGGTC GAGGTGCAGG GCTACGCCTA CCAGGCGGCC
CGGCAGGCCG CGGACCTGCT GGAGGCGTTC GGCCGTCCCG GCGCCGGGCG CTGGCGCGAG
CACTCCGCGG CGCTGGCCGA GCGCTTCCGC GCCCGCTTCT GGGTGGACGG CCCGCGGGGC
AGGTTCCCCG CGCTGGCCCT GGACCGCGAC AAGCGCCCGG TGGACGCGCT GACCAGCAAC
ATCGGGCACC TGCTGGGCAC CGGCCTGCTC ACCGGCGCCG AGGAGGCCGA GGTCGCCGCC
CTGCTGGTCT CACCGGCGAT GGCCGGCGGC TTCGGACTGC GTACGATGTC GGCGGAGGAG
GGCGGGTTCA GCCCGCTGTC CTACCACTGC GGGTCGATCT GGGCCCACGA CACCGCGATC
GTGGTCGCCG GCCTGGCGCG GGCCGGGTTC GGCGCGCAGG CGGCGGAACT CGCCGGGGGG
CTGCTCACCG CGGGCGAGAC GTTCGGCTAC CGGCTGCCGG AGCTGTTCGG CGGCGACGAC
CGCGAGACCC TCGGGCATCC CGTGTCCTAC CCCGCGGCCT GCCGCCCGCA GGCGTGGTCG
GCCGCGGCCG CGGTGACGAT CGTGCACGCC GCGCTGGGCC TCTACCCCGA CGTGCCCGCC
GGCCGGGTGC TGCTCCGCCC GCTCGCGGGC GCTCCCCTGG GCGCGCTCTC CGCGCGCGGG
CTCCGGATCG CCGGTGCCGA GGTGAGTGCG GCGGTGGACG CGGACGGCAT GGTCAGCGTG
GCCGGCCTGC CCGCCTGGAT CCTCCCGGAG ACCGCCGCGG GCAGGCCGTG A
 
Protein sequence
MLDGATSPSP AVTVIEPPAP APAHRLQPLL HDLVSAVMAP TTALSGGDGQ IRPAGVQGLF 
HADSRALSQV RLEIDGREPE AVGYAPHGAG GARFVALARW LGDPSPDPTV RIHRVRQVVP
GGMSERIEIV STASRPVTAT ITLALSCDFA PIEVVKSGGE TTPAAVAGGG PGELTWGSGG
IRVTVAGVDA HAEPAEAGRA GRLCWPVTLA PRGRTTLRWD VAVRDPEAVV IAPARPAEWV
TERGGPRITA TDRRLTRLFE QSLDDLRSLR LAETGAPADA FLGAGVPWFL TLFGRDSIWA
ARMLLPLGTE LAMGTLRVLA RRQGTRLDPG SGEAPGKIMH ELRRHEFALE GDNLRLPAAY
YGTVDATPLW ISLLHDAWRW GAPEAEVAAL LPHLEAALGW LAEHADPDGD GFVEYVDTSG
RGLANQGWKD SGDAVRFHDG RQAEPPIALV EVQGYAYQAA RQAADLLEAF GRPGAGRWRE
HSAALAERFR ARFWVDGPRG RFPALALDRD KRPVDALTSN IGHLLGTGLL TGAEEAEVAA
LLVSPAMAGG FGLRTMSAEE GGFSPLSYHC GSIWAHDTAI VVAGLARAGF GAQAAELAGG
LLTAGETFGY RLPELFGGDD RETLGHPVSY PAACRPQAWS AAAAVTIVHA ALGLYPDVPA
GRVLLRPLAG APLGALSARG LRIAGAEVSA AVDADGMVSV AGLPAWILPE TAAGRP