Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_3947 |
Symbol | |
ID | 8667237 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | - |
Start bp | 4392532 |
End bp | 4393968 |
Gene Length | 1437 bp |
Protein Length | 478 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | |
Product | transporter |
Protein accession | YP_003339601 |
Protein GI | 271965405 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.000887257 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.0113093 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCTGTCAG TACCAGGATC GACAGGCACT CGTTACCGGT ACCGGCCCGA CGCCACAGTC GTCTCCATGA CCGCGACATC CACTGTTGAA GCTCCGGCCC TGCGCCGTGT TCCCTGGTTG CTGACGGTGA TCCTCACCGG GCAGTTCATG GCGATCCTGG ACGTCTCCAT CGTCAACGTC GCCTCTCCCG TGATCCGCGC CGACCTCGGC ACGTCCGGCT CGGGACTCCA GATGATCATC TCCGGCTACA CCATCGCCTA TGCCATGTTG CTGATCACCG GTGCCCGGCT GGGCGGCCGG TACGGCGGGC GCCGCCTGTT CCTGTACGGC CTGGCGGGTT TCACCGCCGC CTCCCTGGCC TGCGGCCTGG CCGTCTCCGC AGGGCAGCTC GTCGCCTTCC GGCTGCTCCA GGGCGCGGGG GCCGCTCTGA TGGTGCCTCA GGTGCTGAGC ATGATCCAGA TGAACTTCGA GGGGACCGCG CGGGCCCGCG CGCTCAGCCT CTACGCGACG GTGATCTCGG GGGCCGCCGT GGCCGGCCAG GTGCTGGGCG GGGTGCTGGT CTCCGCCGAC CTGTACGGCA CGGCGTGGCG GCCGGTGTTC CTGGTGAACG TGCCCATCGG GCTCGGGCTG CTCGTCCTGG GCGCGAGGCT GCTGCCGGCC GACGGTCCCG TGCGCCACCG CCCGCTGGAC CTGCCCGGCC TGGTCACGCT CTCGCTGACG GTCAGTCTCC TGGTGGTGCC GCTGGTGCTG GGCCACGAGC AGGACTGGCC GCTGTGGGGC TGGGCCGCGA TGGCCGCGAG CGTGGCGTTC GCGGGGGTCT TCGTACTGAT GGAGCGGCGG GCCGCCGCGC CTCTGGTGCC CCTGCGAATT CTGCGGGCCC CCGGGGTGGT CACCTCCGCG CTGGCCGTCT TCGGGGTGAT GGCGACCTAC GGCGGATTCC TGTTCGCCCT CGCCCTGCAC CTGCAGGGCC CCCTGGGCGA CAGCCCGCTG CGGGCGGGCC TGACGTTCGT TCCCGCCGCG GCCGCCTTCG CGGTGGTCAG CCTCAACTGG CGGCGGATCC CCGAGCGCCT GCACCGCCGT ATGATCATCG CCTCCTTCGG CCTGGCCGCG CTGGGATACC TGGGGCTGGC ACTGGCGTTG GGCGGCGGCG GCCACGGCCT GCCGTGCCTC TGGGTGGCCC TGGCGGTGAC CGGGGCCGGC CTGGGCGGGG CGTTCAGCCC GGTGCTCGCG GTCGCGCTCA CCCACGTCGC GCCCGAGGAC GCCCCCGACA CCAGCGGCCT GTTCGTCATG GTGACCCAGC TCGGCCAGGT CGTGGGCGTG GCCACCTTCG GCACGCTGTA CCTGAGCACG GGGTCGATCA CGGGCGCCGC CGTGGCCCTG GCGGTCACGG CGCTGGCCAC CGGGGCGTGC GCGCTGCCAC TGCTGCGCCG GCGATGA
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Protein sequence | MLSVPGSTGT RYRYRPDATV VSMTATSTVE APALRRVPWL LTVILTGQFM AILDVSIVNV ASPVIRADLG TSGSGLQMII SGYTIAYAML LITGARLGGR YGGRRLFLYG LAGFTAASLA CGLAVSAGQL VAFRLLQGAG AALMVPQVLS MIQMNFEGTA RARALSLYAT VISGAAVAGQ VLGGVLVSAD LYGTAWRPVF LVNVPIGLGL LVLGARLLPA DGPVRHRPLD LPGLVTLSLT VSLLVVPLVL GHEQDWPLWG WAAMAASVAF AGVFVLMERR AAAPLVPLRI LRAPGVVTSA LAVFGVMATY GGFLFALALH LQGPLGDSPL RAGLTFVPAA AAFAVVSLNW RRIPERLHRR MIIASFGLAA LGYLGLALAL GGGGHGLPCL WVALAVTGAG LGGAFSPVLA VALTHVAPED APDTSGLFVM VTQLGQVVGV ATFGTLYLST GSITGAAVAL AVTALATGAC ALPLLRRR
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