Gene Sros_3947 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_3947 
Symbol 
ID8667237 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp4392532 
End bp4393968 
Gene Length1437 bp 
Protein Length478 aa 
Translation table11 
GC content73% 
IMG OID 
Producttransporter 
Protein accessionYP_003339601 
Protein GI271965405 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000887257 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0113093 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTGTCAG TACCAGGATC GACAGGCACT CGTTACCGGT ACCGGCCCGA CGCCACAGTC 
GTCTCCATGA CCGCGACATC CACTGTTGAA GCTCCGGCCC TGCGCCGTGT TCCCTGGTTG
CTGACGGTGA TCCTCACCGG GCAGTTCATG GCGATCCTGG ACGTCTCCAT CGTCAACGTC
GCCTCTCCCG TGATCCGCGC CGACCTCGGC ACGTCCGGCT CGGGACTCCA GATGATCATC
TCCGGCTACA CCATCGCCTA TGCCATGTTG CTGATCACCG GTGCCCGGCT GGGCGGCCGG
TACGGCGGGC GCCGCCTGTT CCTGTACGGC CTGGCGGGTT TCACCGCCGC CTCCCTGGCC
TGCGGCCTGG CCGTCTCCGC AGGGCAGCTC GTCGCCTTCC GGCTGCTCCA GGGCGCGGGG
GCCGCTCTGA TGGTGCCTCA GGTGCTGAGC ATGATCCAGA TGAACTTCGA GGGGACCGCG
CGGGCCCGCG CGCTCAGCCT CTACGCGACG GTGATCTCGG GGGCCGCCGT GGCCGGCCAG
GTGCTGGGCG GGGTGCTGGT CTCCGCCGAC CTGTACGGCA CGGCGTGGCG GCCGGTGTTC
CTGGTGAACG TGCCCATCGG GCTCGGGCTG CTCGTCCTGG GCGCGAGGCT GCTGCCGGCC
GACGGTCCCG TGCGCCACCG CCCGCTGGAC CTGCCCGGCC TGGTCACGCT CTCGCTGACG
GTCAGTCTCC TGGTGGTGCC GCTGGTGCTG GGCCACGAGC AGGACTGGCC GCTGTGGGGC
TGGGCCGCGA TGGCCGCGAG CGTGGCGTTC GCGGGGGTCT TCGTACTGAT GGAGCGGCGG
GCCGCCGCGC CTCTGGTGCC CCTGCGAATT CTGCGGGCCC CCGGGGTGGT CACCTCCGCG
CTGGCCGTCT TCGGGGTGAT GGCGACCTAC GGCGGATTCC TGTTCGCCCT CGCCCTGCAC
CTGCAGGGCC CCCTGGGCGA CAGCCCGCTG CGGGCGGGCC TGACGTTCGT TCCCGCCGCG
GCCGCCTTCG CGGTGGTCAG CCTCAACTGG CGGCGGATCC CCGAGCGCCT GCACCGCCGT
ATGATCATCG CCTCCTTCGG CCTGGCCGCG CTGGGATACC TGGGGCTGGC ACTGGCGTTG
GGCGGCGGCG GCCACGGCCT GCCGTGCCTC TGGGTGGCCC TGGCGGTGAC CGGGGCCGGC
CTGGGCGGGG CGTTCAGCCC GGTGCTCGCG GTCGCGCTCA CCCACGTCGC GCCCGAGGAC
GCCCCCGACA CCAGCGGCCT GTTCGTCATG GTGACCCAGC TCGGCCAGGT CGTGGGCGTG
GCCACCTTCG GCACGCTGTA CCTGAGCACG GGGTCGATCA CGGGCGCCGC CGTGGCCCTG
GCGGTCACGG CGCTGGCCAC CGGGGCGTGC GCGCTGCCAC TGCTGCGCCG GCGATGA
 
Protein sequence
MLSVPGSTGT RYRYRPDATV VSMTATSTVE APALRRVPWL LTVILTGQFM AILDVSIVNV 
ASPVIRADLG TSGSGLQMII SGYTIAYAML LITGARLGGR YGGRRLFLYG LAGFTAASLA
CGLAVSAGQL VAFRLLQGAG AALMVPQVLS MIQMNFEGTA RARALSLYAT VISGAAVAGQ
VLGGVLVSAD LYGTAWRPVF LVNVPIGLGL LVLGARLLPA DGPVRHRPLD LPGLVTLSLT
VSLLVVPLVL GHEQDWPLWG WAAMAASVAF AGVFVLMERR AAAPLVPLRI LRAPGVVTSA
LAVFGVMATY GGFLFALALH LQGPLGDSPL RAGLTFVPAA AAFAVVSLNW RRIPERLHRR
MIIASFGLAA LGYLGLALAL GGGGHGLPCL WVALAVTGAG LGGAFSPVLA VALTHVAPED
APDTSGLFVM VTQLGQVVGV ATFGTLYLST GSITGAAVAL AVTALATGAC ALPLLRRR